ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us PROSITE Swiss-Prot
Search for

PROSITE documentation PDOC00009

Amidation site

Description:

The precursor of hormones and other active peptides which are C-terminally amidated is always directly followed [1,2] by a glycine residue which provides the amide group, and most often by at least two consecutive basic residues (Arg or Lys) which generally function as an active peptide precursor cleavage site. Although all amino acids can be amidated, neutral hydrophobic residues such as Val or Phe are good substrates, while charged residues such as Asp or Arg are much less reactive. C-terminal amidation has not yet been shown to occur in unicellular organisms or in plants.

Last update:

June 1988 / First entry.

Technical section:

PROSITE method (with tools and information) covered by this documentation:

AMIDATION, PS00009Amidation site  (PATTERN with a high probability of occurrence!)
Consensus pattern: x - G - [RK] - [RK]
x is the amidation site
Scan Swiss-Prot/TrEMBL entries against PS00009
view ligand binding statistics

References:

1 AuthorsKreil G.
TitleOccurrence, detection, and biosynthesis of carboxy-terminal amides.
SourceMethods Enzymol. 106:218-223(1984).
PubMed ID6548541
2 AuthorsBradbury A.F., Smyth D.G.
TitleBiosynthesis of the C-terminal amide in peptide hormones.
SourceBiosci. Rep. 7:907-916(1987).
PubMed ID3331120

Copyright:

PROSITE is copyright. It is produced by the Swiss Institute of Bioinformatics (SIB). There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to license@isb-sib.ch or see: http://www.expasy.org/prosite/prosite_license.htm.

Miscellaneous:

View entry in original PROSITE document format
View entry in raw text format (no links)

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us PROSITE Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland