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Entry: PS00504

General information about the entry
Entry nameFRD_SDH_FAD_BINDING
Accession numberPS00504
Entry typePATTERN
DateMAY-1991 (CREATED); NOV-1995 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE DocumentationPDOC00393
Name and characterization of the entry
DescriptionFumarate reductase / succinate dehydrogenase FAD-binding site.
PatternR-[ST]-H-[ST]-x(2)-A-x-G-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771.
  • Total number of hits in UniProtKB/Swiss-Prot: 40 hits in 40 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 40 hits in 40 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,FAD_binding
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
DHSA1_ARATH (O82663), DHSA2_ARATH (Q9ZPX5), DHSAA_XENLA (Q6PA58), 
DHSAB_XENLA (Q801S2), DHSA_BACSU  (P08065), DHSA_BOVIN  (P31039), 
DHSA_CAEEL  (Q09508), DHSA_CHICK  (Q9YHT1), DHSA_COXBU  (P51054), 
DHSA_DANRE  (Q7ZVF3), DHSA_DICDI  (Q9U3X4), DHSA_DROME  (Q94523), 
DHSA_ECO57  (P0AC43), DHSA_ECOL6  (P0AC42), DHSA_ECOLI  (P0AC41), 
DHSA_HUMAN  (P31040), DHSA_MACFA  (Q8HXW3), DHSA_MOUSE  (Q8K2B3), 
DHSA_ORYSJ  (Q6ZDY8), DHSA_PARDE  (Q59661), DHSA_PONAB  (Q5R616), 
DHSA_RAT    (Q920L2), DHSA_RICBR  (Q1RHB9), DHSA_RICCN  (Q92J97), 
DHSA_RICFE  (Q4UJM1), DHSA_RICPR  (P31038), DHSA_RICTY  (Q68XN9), 
DHSA_SALTY  (Q8ZQU3), DHSA_SCHPO  (Q9UTJ7), DHSA_XENTR  (Q28ED0), 
DHSA_YEAST  (Q00711), DHSX_YEAST  (P47052), FRDA_ECOLI  (P00363), 
FRDA_HAEIN  (P44894), FRDA_HELPJ  (Q9ZMP0), FRDA_HELPY  (O06913), 
FRDA_MYCBO  (P64175), FRDA_MYCTU  (P64174), FRDA_PROVU  (P20922), 
FRDA_WOLSU  (P17412)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1E7P; 1KF6; 1KFY; 1L0V; 1NEK; 1NEN; 1ORZ; 1PB4; 1QLB; 1YQ3; 1YQ4; 2ACZ; 2AD0; 2B76; 2BS2; 2BS3; 2BS4; 2FBW; 2H88; 2H89; 3CIR;

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