PROSITE - Entry: PS00535

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Entry: PS00535

General information about the entry
Entry name	COMPLEX1_49K
Accession number	PS00535
Entry type	PATTERN
Date	DEC-1991 (CREATED); DEC-2001 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE Documentation	PDOC00521
Name and characterization of the entry
Description	Respiratory chain NADH dehydrogenase 49 Kd subunit signature.
Pattern	[LIVMH]-H-[RT]-[GA]-x-E-K-[LIVMTN]-x-E-x-[KRQ].
Numerical results
UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771. Total number of hits in UniProtKB/Swiss-Prot: 69 hits in 69 different sequences Number of hits on proteins that are known to belong to the set under consideration: 69 hits in 69 different sequences Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences Number of false hits (on unrelated proteins): 0 hits in 0 different sequences Number of known missed hits: 5 Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
Comments
VERSION: 1
Cross-references
UniProtKB/Swiss-Prot	True positive hits: HYCE_ECOLI (P16431), HYFG_ECOLI (P77329), NDHH_ADICA (Q85FG9), NDHH_ANASP (Q8YRT8), NDHH_ANTFO (Q85UU0), NDHH_ARATH (P56753), NDHH_CHAGL (Q8M9T5), NDHH_HORVU (O98691), NDHH_LOTJA (Q9BBN8), NDHH_MAIZE (P25709), NDHH_MARPO (P12131), NDHH_MESVI (Q9MUL0), NDHH_NEPOL (Q9TKV6), NDHH_OENEH (Q9MTH6), NDHH_ORYNI (Q6ENA1), NDHH_ORYSA (P0C335), NDHH_ORYSI (P0C336), NDHH_ORYSJ (P0C337), NDHH_PSINU (Q8WHX3), NDHH_SACHY (Q6L3D4), NDHH_SACOF (Q6ENP1), NDHH_SECCE (P27758), NDHH_SOLLC (Q2MI44), NDHH_SOLTU (Q2VEC5), NDHH_SOYBN (Q2PMN8), NDHH_SPIOL (Q9M3I5), NDHH_SYNY3 (P27724), NDHH_TOBAC (P12133), NDHH_WHEAT (Q95H42), NDUS2_ACACA (Q37384), NDUS2_ARATH (P93306), NDUS2_BOVIN (P17694), NDUS2_CAEEL (Q93873), NDUS2_CAFRO (Q9TAJ7), NDUS2_DICCI (Q2LCR5), NDUS2_DICDI (Q23883), NDUS2_GORGO (Q0MQG4), NDUS2_HUMAN (O75306), NDUS2_MOUSE (Q91WD5), NDUS2_NEPOL (Q9TC96), NDUS2_NEUCR (P22142), NDUS2_PANTR (Q0MQG5), NDUS2_PARTE (P15689), NDUS2_PONAB (Q0MQG3), NDUS2_PROWI (Q37619), NDUS2_PYLLI (Q37720), NDUS2_RAT (Q641Y2), NDUS2_RECAM (O21270), NDUS2_TRYBB (P21301), NQO4_PARDE (P29916), NQO4_THET8 (Q56220), NUOCD_BUCAI (P57254), NUOCD_BUCAP (Q8K9Y5), NUOCD_BUCBP (Q89AU4), NUOCD_ECOLI (P33599), NUOCD_PSEAE (Q9I0J9), NUOCD_SALTI (P0A1Y7), NUOCD_SALTY (P0A1Y6), NUOD1_RHIME (P56907), NUOD_DEIRA (Q9RU89), NUOD_MYCBO (P65570), NUOD_MYCTU (P65569), NUOD_RHOCA (O07310), NUOD_RICBR (Q1RJI9), NUOD_RICCN (Q92ID8), NUOD_RICFE (Q4UM08), NUOD_RICPR (Q9ZDH4), NUOD_RICTY (Q68X19), Y515_METJA (Q57935) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): NDUS2_NICSY (Q36450), NDUS2_NYCOV (Q5DUX5), NUOD2_RHIME (P56908), NUOD_CAMJE (Q9PM99), Y1027_METJA (Q58433) `Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): NDUS2_SOLTU (P80264) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
PDB [Detailed view]	2FUG;

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