PROSITE - Entry: PS00641

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Entry: PS00641

General information about the entry
Entry name	COMPLEX1_75K_1
Accession number	PS00641
Entry type	PATTERN
Date	JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE Documentation	PDOC00554
Name and characterization of the entry
Description	Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1.
Pattern	P-x(2)-C-[YWSD]-x(7)-[GA]-x-C-R-x-C.
Numerical results
UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771. Total number of hits in UniProtKB/Swiss-Prot: 43 hits in 43 different sequences Number of hits on proteins that are known to belong to the set under consideration: 43 hits in 43 different sequences Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences Number of false hits (on unrelated proteins): 0 hits in 0 different sequences Number of known missed hits: 1 Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1 Precision (true hits / (true hits + false positives)): 100.00 % Recall (true hits / (true hits + false negatives)): 97.73 %
Comments
Taxonomic range: Eukaryotes, Prokaryotes (Bacteria) Maximum known number of repetitions of the pattern in a single protein: 1 `Interesting' site in the pattern: 3,iron_sulfur(?) `Interesting' site in the pattern: 8,iron_sulfur(?) `Interesting' site in the pattern: 11,iron_sulfur(?) VERSION: 1
Cross-references
UniProtKB/Swiss-Prot	True positive hits: HOXU_RALEH (P22318), NDUS1_ARATH (Q9FGI6), NDUS1_BOVIN (P15690), NDUS1_DICCI (Q2LCP5), NDUS1_DICDI (Q34312), NDUS1_DROME (Q94511), NDUS1_GORGO (Q0MQG1), NDUS1_HUMAN (P28331), NDUS1_MACFA (Q4R6K9), NDUS1_MOUSE (Q91VD9), NDUS1_NEUCR (P24918), NDUS1_PANTR (Q0MQG2), NDUS1_PONAB (Q5R911), NDUS1_RAT (Q66HF1), NDUS1_RECAM (O21241), NDUS1_SOLTU (Q43644), NQO3_PARDE (P29915), NQO3_THET8 (Q56223), NUOG2_RHIME (P56914), NUOG_BLOFL (Q7VRV7), NUOG_BUCAI (P57257), NUOG_BUCAP (Q8K9Y2), NUOG_BUCBP (Q89AU1), NUOG_ECO57 (Q8XCX2), NUOG_ECOL6 (Q8FFJ9), NUOG_ECOLI (P33602), NUOG_MYCBO (P59962), NUOG_MYCTU (P95175), NUOG_PSEAE (Q9I0J6), NUOG_PSEFL (Q9KGW3), NUOG_PSEPK (Q88FH2), NUOG_PSESM (Q87ZQ4), NUOG_RICBR (Q1RKD2), NUOG_RICCN (Q92G92), NUOG_RICFE (Q4UK22), NUOG_RICPR (Q9ZCF6), NUOG_RICTY (Q68VV2), NUOG_SALTI (P0A1Y5), NUOG_SALTY (P0A1Y4), NUOG_SHEON (Q8EI34), NUOG_SHIFL (Q7UC56), NUOG_STRCO (Q9XAR0), NUOG_YERPE (Q8ZDL2) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): NDUS1_ACACA (Q37373) `Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): HOXU_RHOOP (P22659) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
PDB [Detailed view]	2FUG;

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