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HAMAP: Alkalilimnicola ehrlichei (strain MLHE-1) complete proteome

General information

Species:  Alkalilimnicola ehrlichei (strain MLHE-1)
Species code: ALHEH
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola (TaxID: 187272) [NEWT/ NCBI]
Description: An anaerobic, facultatively autotrophic arsenite oxidizing bacterium that respires nitrate or nitrite. The cells are short motile rods. It was isolated from bottom waters of Mono Lake, California USA, a stratified soda lake with high pH and high salt levels. It is a gamma-Proteobacterium located in the Ectothiorhodospira clade of photosynthetic bacteria that occur in soda lakes. However, strain MLHE-1 is not a phototroph, but does grow as an anaerobic chemoautotroph by linking oxidation of arsenite (As III), hydrogen, or sulfide to the reduction of nitrate. It contains Form 1 RuBisCo genes for fixation of CO2 during chemoautotrophic growth, but can also grow as a heterotroph on acetate either with nitrate or air. However, arsenite is only oxidized under anaerobic conditions. This strain is very likely to be helpful to our understanding of As-mobility in subsurface waters.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 2
Number of inteins: 2 in 2 different sequences
Statistics: Number of ALHEH entries in the UniProt Knowledgebase: 2862 (309 in UniProtKB/Swiss-Prot + 2553 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    MLHE-1
Genome structure
Chromosome EMBL accession number CP000453 (circular; 3,275,944 bp) (download entry) (download Genome Reviews).
References
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Oremland R.S., Hoeft S.E., Switzer-Blum J., Kulp T., King G., Tabita R., Witte B., Santini J.M., Basu P., Hollibaugh J.T., Xie G., Stolz J.F., Richardson P. ;
"Complete sequence of Alkalilimnicola ehrilichei MLHE-1.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
Web links
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid187272%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Aehr_HLHE1
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p15763_Alk_ehrli
 EBI Proteome Analysis page



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