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HAMAP: Methanococcus maripaludis complete proteome

General information

Species:  Methanococcus maripaludis
Species code: METMP
Taxonomy: Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus (TaxID: 39152) [NEWT/ NCBI]
Description: Mesophilic hydrogenotrophic, nitrogen-fixing methanogen that was isolated from a salt-marsh sediment. It is an excellent laboratory model because of rapid, reliable growth, a robust set of genetic tools and the availability of expression arrays and proteomics data.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of METMP entries in the UniProt Knowledgebase: 1722 (322 in UniProtKB/Swiss-Prot + 1400 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    S2 / LL
Genome structure:
Chromosome EMBL accession number BX950229 (circular; 1,661,137 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15466049; [ NCBI , EBI , Israel , Japan ]
Hendrickson E.L., Kaul R., Zhou Y., Bovee D., Chapman P., Chung J., Conway de Macario E., Dodsworth J.A., Gillett W., Graham D.E., Hackett M., Haydock A.K., Kang A., Land M.L., Levy R., Lie T.J., Major T.A., Moore B.C., Porat I., Palmeiri A., Rouse G., Saenphimmachak C., Soell D., Van Dien S., Wang T., Whitman W.B., Xia Q., Zhang Y., Larimer F.W., Olson M.V., Leigh J.A. ;
"Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.";
J. Bacteriol. 186:6956-6969(2004).
Web links:
Official genome site(s):
http://faculty.washington.edu/leighj/mm.html
http://gib.genes.nig.ac.jp/single/index.php?spid=Mmar_S2
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Methanococcus&GLspecies=maripaludis&GLstrain=S2
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid39152%5Borgn%5D
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/archaea/Methanococcus_maripaludis.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p10632_Met_marip
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntmm04
 EBI Proteome Analysis page



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