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HAMAP: Pseudomonas putida (strain GB-1) complete proteome

General information

Species:  Pseudomonas putida (strain GB-1)
Species code: PSEPG
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas (TaxID: 76869) [NEWT/ NCBI]
Description: Members of the genus Pseudomonas are characterized by their ability to grow in simple media at the expense of a great variety of organic compounds. They have a strict respiratory metabolism and are motile by one or several polar flagella. They are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. They are are found in nature in a biofilm or in planktonic form.
When supplied with Mn2+ ions P.putida GB-1 deposits manganese oxide around the outer membrane in the early stationary growth phase. The presence of a novel secretion system for the transport of manganese-oxidizing enzymes to the cell surface has been suggested for this strain (adapted from PubMed 12581354).
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of PSEPG entries in the UniProt Knowledgebase: 5396 (426 in UniProtKB/Swiss-Prot + 4970 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    GB-1
Genome structure:
Chromosome EMBL accession number CP000926 (circular; 6,078,430 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., McCarthy J.K., Richardson P. ;
"Complete sequence of Pseudomonas putida GB-1.";
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/psepg/psepg.info.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=17629
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Pput_GB1
PseudoDB: http://xbase.bham.ac.uk/pseudodb/genome.pl?id=1653
 EBI Proteome Analysis page



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