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HAMAP: Thermoplasma volcanium complete proteome

General information

Species:  Thermoplasma volcanium
Species code: THEVO
Taxonomy: Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma (TaxID: 50339) [NEWT/ NCBI]
Description: Gram-negative thermophilic archaeon lacking a cell wall, isolated from coal refuse piles and solfatara fields. Its optimum growth temperature is 60 degrees Celsius. It is adapted to aerobic as well as anaerobic environments.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 1
Number of inteins: 1
Statistics: Number of THEVO entries in the UniProt Knowledgebase: 1523 (289 in UniProtKB/Swiss-Prot + 1234 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1
Genome structure:
Chromosome EMBL accession number BA000011 (circular; 1,584,804 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=20570466; PubMed=11121031; [ NCBI , EBI , Israel , Japan ]
Kawashima T., Amano N., Koike H., Makino S., Higuchi S., Kawashima-Ohya Y., Watanabe K., Yamazaki M., Kanehori K., Kawamoto T., Nunoshiba T., Yamamoto Y., Aramaki H., Makino K., Suzuki M. ;
"Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium.";
Proc. Natl. Acad. Sci. U.S.A. 97:14257-14262(2000).
Web links:
ARCHAIC db: http://www.aist.go.jp/RIODB/archaic/
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Thermoplasma&GLspecies=volcanium&GLstrain=GSS1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid273116%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Tvol_GSS1
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/archaea/Thermoplasma_volcanium.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p206_The_volca
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=nttv01
 EBI Proteome Analysis page



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