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UniProtKB/Swiss-Prot entry A2XFC7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name APX1_ORYSI
Primary accession number A2XFC7
Secondary accession numbers P93404 Q84QS3 Q8GZZ2
Integrated into Swiss-Prot on September 11, 2007
Sequence was last modified on March 20, 2007 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 11)
Name and origin of the protein
Protein name L-ascorbate peroxidase 1, cytosolic
Synonyms APXa
EC 1.11.1.11
OsAPx01
Gene name
Name: APX1
ORFNames: OsI_010770
From
Oryza sativa subsp. indica (Rice) [TaxID: 39946] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Khao Dawk Mali 105;
Duriyapong F., Peyachoknagul S., Apisitwanich S.;
"Cloning of ascorbate peroxidase gene from indica rice, Khao Dawk Mali 105.";
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. 93-11;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[3]
NOMENCLATURE.
DOI=10.1007/s00239-004-2666-z; PubMed=15599508 [NCBI, ExPASy, EBI, Israel, Japan]
Teixeira F.K., Menezes-Benavente L., Margis R., Margis-Pinheiro M.;
"Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.";
J. Mol. Evol. 59:761-770(2004).
[4]
INDUCTION.
DOI=10.1016/j.jplph.2004.06.004; PubMed=15832681 [NCBI, ExPASy, EBI, Israel, Japan]
Tsai Y.-C., Hong C.-Y., Liu L.-F., Kao C.H.;
"Expression of ascorbate peroxidase and glutathione reductase in roots of rice seedlings in response to NaCl and H2O2.";
J. Plant Physiol. 162:291-299(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY254495; AAP13093.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000128; EAY89537.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP Q43758; 1OAF. [HSSP ENTRY / PDB]
SMR A2XFC7; 2-250.
ModBase A2XFC7.
Organism-specific databases
Gramene P93404; -.
Family and domain databases
InterPro IPR002207; Asc_perxdse.
IPR002016; Haem_peroxidase_pln/fun/bac.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00459; ASPEROXIDASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS A2XFC7.
Other
ProtoNet A2XFC7.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cytoplasm; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Potassium; Stress response.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed (By similarity). 
CHAIN   2   250  249     L-ascorbate peroxidase 1, cytosolic. PRO_0000300257
ACT_SITE   42    42        Proton acceptor (By similarity). 
METAL   163   163        Iron (heme axial ligand) (By similarity). 
METAL   164   164        Potassium or calcium (By similarity). 
METAL   180   180        Potassium or calcium (By similarity). 
METAL   182   182        Potassium or calcium (By similarity). 
METAL   187   187        Potassium or calcium (By similarity). 
SITE   38    38  1     Transition state stabilizer (By similarity). 
CONFLICT   218   218        C -> R (in Ref. 1; AAP13093). 
Sequence information
Length: 250 AA [This is the length of the unprocessed precursor] Molecular weight: 27103 Da [This is the MW of the unprocessed precursor] CRC64: 7867C10191CC92E9 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAKNYPVVSA EYQEAVEKAR QKLRALIAEK SCAPLMLRLA WHSAGTFDVS SKTGGPFGTM 

        70         80         90        100        110        120 
KTPAELSHAA NAGLDIAVRM LEPIKEEIPT ISYADFYQLA GVVAVEVSGG PAVPFHPGRE 

       130        140        150        160        170        180 
DKPAPPPEGR LPDATKGSDH LRQVFGAQMG LSDQDIVALS GGHTLGRCHK ERSGFEGPWT 

       190        200        210        220        230        240 
RNPLQFDNSY FTELLSGDKE GLLQLPSDKA LLSDPAFCPL VEKYAADEKA FFEDYKEAHL 

       250 
KLSELGFADA 

A2XFC7 in FASTA format

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