NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y., Elmerich C., Lin M., Jin Q.;
"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501.";
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.

Comments

CATALYTIC ACTIVITY: Coproporphyrinogen-III + O₂ + 2 H⁺ = protoporphyrinogen-IX + 2 CO₂ + 2 H₂O.
PATHWAY: Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen III (O2 route): step 1/1 .
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the aerobic coproporphyrinogen III oxidase family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

CP000304; ABP77734.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

YP_001170576.1; -.

3D structure databases

ModBase

A4VFI3.

Ontologies

GO:0005737;	Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109;	Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0006779;	Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.

Family and domain databases

HAMAP

MF_00333; -; 1.
PBIL [Tree]

InterPro

IPR001260; Coprogen_oxidas.
Graphical view of domain structure.

PANTHER

PTHR10755; Coprogen_oxidas; 1.

Pfam

PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF000166; Coproporphyri_ox; 1.

PRINTS

PR00073; COPRGNOXDASE.

PROSITE

PS01021; COPROGEN_OXIDASE; 1.

BLOCKS

A4VFI3.

Genome annotation databases

GeneID

5095101; -.

GenomeReviews

CP000304_GR; PST_0026.

KEGG

psa:PST_0026; -.

CMR

A4VFI3; PST_0026.

Other

ProtoNet

A4VFI3.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.

Features

Feature table viewer

`Key`	`From To`	`Length`		`Description`	`FTId`
`CHAIN`	`1 306`	`306`		`Coproporphyrinogen III oxidase, aerobic.`	`PRO_1000019491`

Sequence information

Length: 306 AA [This is the length of the unprocessed precursor]

Molecular weight: 34659 Da [This is the MW of the unprocessed precursor]

CRC64: 52FF10FA9D475841 [This is a checksum on the sequence]

        10         20         30         40         50         60 
MNDRTEAVKA YLLDLQDRIC AALEVEDGGA RFVEDAWTRP GGGGGRTRVI ENGALIEKGG 

        70         80         90        100        110        120 
VNFSHVHGDS LPPSASAHRP ELAGRSFEAL GVSLVIHPHN PYVPTSHANV RFFIAEKDGE 

       130        140        150        160        170        180 
EPVWWFGGGF DLTPYYGAEE DCVHWHRVAR DACAPFGAEV YPRYKEWCDR YFHIKHRNEP 

       190        200        210        220        230        240 
RGVGGLFFDD LNQWDFDTSF AFMRAVGDAY LQAYLPIVQR RKATPFGERE RQFQLLRRGR 

       250        260        270        280        290        300 
YVEYNLVYDR GTLFGLQSGG RTESILMSLP PQVAWGYDKR PEPGSPEARL TEYFLQDRDW 


LAAAPA

A4VFI3 in FASTA format

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View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools