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UniProtKB/Swiss-Prot entry O35386


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PAHX_MOUSE
Primary accession number O35386
Secondary accession number O08527
Integrated into Swiss-Prot on July 15, 1999
Sequence was last modified on January 1, 1998 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 68)
Name and origin of the protein
Protein name Phytanoyl-CoA dioxygenase, peroxisomal [Precursor]
Synonyms EC 1.14.11.18
Phytanoyl-CoA alpha-hydroxylase
PhyH
Phytanic acid oxidase
Lupus nephritis-associated peptide 1
Gene name
Name: Phyh
Synonyms: Ln1, Lnap1, Pahx
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1038/ng1097-185; PubMed=9326939 [NCBI, ExPASy, EBI, Israel, Japan]
Mihalik S.J., Morrell J.C., Kim D., Sachsteder K.A., Watkins P.A., Gould S.J.;
"Identification of PAHX, a Refsum disease gene.";
Nat. Genet. 17:185-189(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=BALB/c;
TISSUE=Kidney;
DOI=10.1006/bbrc.1996.1805; PubMed=8954131 [NCBI, ExPASy, EBI, Israel, Japan]
Iwano M., Ueno M., Miyazaki M., Harada T., Nagai Y., Hirano M., Dohi Y., Akai Y., Kurioka H., Dohi K.;
"Molecular cloning and expression of a novel peptide (LN1) gene: reduced expression in the renal cortex of lupus nephritis in MRL/lpr mouse.";
Biochem. Biophys. Res. Commun. 229:355-360(1996).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Mammary gland;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
TISSUE SPECIFICITY, AND INTERACTION WITH PHYHIP.
DOI=10.1016/S0169-328X(99)00304-6; PubMed=10686344 [NCBI, ExPASy, EBI, Israel, Japan]
Lee Z.H., Kim H.-H., Ahn K.Y., Seo K.H., Kim J.K., Bae C.S., Kim K.K.;
"Identification of a brain specific protein that associates with a Refsum disease gene product, phytanoyl-CoA alpha-hydroxylase.";
Brain Res. Mol. Brain Res. 75:237-247(2000).
Comments
  • FUNCTION: Converts phytanoyl-CoA to 2-hydroxyphytanoyl-CoA.
  • CATALYTIC ACTIVITY: Phytanoyl-CoA + 2-oxoglutarate + O2 = 2-hydroxyphytanoyl-CoA + succinate + CO2.
  • COFACTOR: Iron.
  • COFACTOR: Ascorbate.
  • PATHWAY: Lipid metabolism; fatty acid metabolism.
  • SUBUNIT: Interacts specifically with the immunophilin FKBP52 and PHYHIP.
  • SUBCELLULAR LOCATION: Peroxisome.
  • TISSUE SPECIFICITY: Ubiquitously expressed in all tissues with significant levels detected in the embryonic and neonatal heart and liver. In the adult, significant levels are detected in the liver, kidney, heart, gut, brain and aorta.
  • DISEASE: Defects in Phyh are the cause of lupus nephritis, a severe autoimmune disease. Phyh could be involved in a reaction against the progression of the disease, because its expression is low in the early stage of the disease in the renal cortex of MRL/lpr mice.
  • SIMILARITY: Belongs to the PhyH family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF023463; AAB81835.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D88670; BAA19003.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC002018; AAH02018.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JC5242; JC5242.
RefSeq NP_034856.1; -.
UniGene Mm.391704
3D structure databases
SMR O35386; 44-322.
ModBase O35386.
PTM databases
PhosphoSite O35386; -.
Organism-specific databases
MGI MGI:891978; Phyh.
Gene expression databases
ArrayExpress O35386; -.
CleanEx MM_PHYH; -.
GermOnline ENSMUSG00000026664; Mus musculus.
Ontologies
GO
GO:0005777; Cellular component: peroxisome (traceable author statement from MGI).
GO:0003824; Molecular function: catalytic activity (inferred from direct assay from MGI).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from MGI).
GO:0001561; Biological process: fatty acid alpha-oxidation (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR008775; Phytyl_CoA_dOase.
Graphical view of domain structure.
Pfam PF05721; PhyH; 1.
Pfam graphical view of domain structure.
BLOCKS O35386.
Genome annotation databases
Ensembl ENSMUSG00000026664; Mus musculus. [Contig view]
GeneID 16922; -.
KEGG mmu:16922; -.
Phylogenomic databases
HOGENOM O35386; -.
HOVERGEN O35386; -.
Other
SOURCE Phyh; Mus musculus.
ProtoNet O35386.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Iron; Oxidoreductase; Peroxisome; Transit peptide; Vitamin C.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
TRANSIT   1    30  30     Peroxisome (By similarity). 
CHAIN   31   338  308     Phytanoyl-CoA dioxygenase, peroxisomal. PRO_0000024054
CONFLICT   2     2        N -> K (in Ref. 2; BAA19003). 
Sequence information
Length: 338 AA [This is the length of the unprocessed precursor] Molecular weight: 38607 Da [This is the MW of the unprocessed precursor] CRC64: 9363F4322D59360E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNLTRAGARL QVLLGHLGRP SAPTIVAQPV SGLASPASFQ PEQFQYTLDN NVLTLEQRKF 

        70         80         90        100        110        120 
YEENGFLVIK NLVSDDDIQR FRAEFERICR EEVKPPGIVI MRDVALAKQD YMPSDRMVSK 

       130        140        150        160        170        180 
IQDFQEDEEL FRYCLLPEIL KYVECFTGPN IMALHGMLIN KPPDVGKKTS RHPLHQDLHY 

       190        200        210        220        230        240 
FPFRPSNLIV CAWTAMEHID RNNGCLVVLP GTHKGTLKPH DYPKWEGGVN KMYHGIQDYD 

       250        260        270        280        290        300 
PNSPRVHLVM EKGDTVFFHP LLIHGSGRNK TQGFRKAISC HFGSSDCQCI DVSGTSQENI 

       310        320        330 
AREVVEMAEK KYGFQGVMDF KDTWIFRSRL VKGERINI 

O35386 in FASTA format

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