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UniProtKB/Swiss-Prot entry O49293


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PER13_ARATH
Primary accession number O49293
Secondary accession numbers None
Integrated into Swiss-Prot on November 25, 2002
Sequence was last modified on November 25, 2002 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 62)
Name and origin of the protein
Protein name Peroxidase 13 [Precursor]
Synonyms Atperox P13
EC 1.11.1.7
Gene name
Name: PER13
Synonyms: P13
OrderedLocusNames: At1g77100
ORFNames: F22K20.17
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048500; PubMed=11130712 [NCBI, ExPASy, EBI, Israel, Japan]
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
Nature 408:816-820(2000).
[2]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1016/S0378-1119(02)00465-1; PubMed=12034502 [NCBI, ExPASy, EBI, Israel, Japan]
Tognolli M., Penel C., Greppin H., Simon P.;
"Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.";
Gene 288:129-138(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AC002291; AAC00622.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR H96799; H96799.
UniGene At.52544
3D structure databases
HSSP Q39034; 1QGJ. [HSSP ENTRY / PDB]
ModBase O49293.
Protein family/group databases
PeroxiBase 94; AtPrx13.
Organism-specific databases
GeneFarm 1496; 61.
TAIR At1g77100; -.
Gene expression databases
ArrayExpress O49293; -.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; FALSE_NEG.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS O49293.
Proteomic databases
ProMEX O49293; -.
Genome annotation databases
GenomeReviews CT485782_GR; AT1G77100.
NMPDR fig|3702.1.peg.7249; -.
Other
ProtoNet O49293.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Pyrrolidone carboxylic acid; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    22  22     Potential. 
CHAIN   23   319  297     Peroxidase 13. PRO_0000023679
ACT_SITE   64    64        Proton acceptor (By similarity). 
METAL   65    65        Calcium 1 (By similarity). 
METAL   68    68        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   70    70        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   72    72        Calcium 1 (By similarity). 
METAL   74    74        Calcium 1 (By similarity). 
METAL   189   189        Iron (heme axial ligand) (By similarity). 
METAL   190   190        Calcium 2 (By similarity). 
METAL   235   235        Calcium 2 (By similarity). 
METAL   238   238        Calcium 2 (By similarity). 
METAL   243   243        Calcium 2 (By similarity). 
BINDING   158   158        Substrate; via carbonyl oxygen (By similarity). 
SITE   60    60  1     Transition state stabilizer (By similarity). 
MOD_RES   23    23        Pyrrolidone carboxylic acid (By similarity). 
CARBOHYD   280   280        N-linked (GlcNAc...) (Potential). 
DISULFID   33   111        By similarity. 
DISULFID   66    71        By similarity. 
DISULFID   117   315        By similarity. 
DISULFID   196   222        By similarity. 
Sequence information
Length: 319 AA [This is the length of the unprocessed precursor] Molecular weight: 34765 Da [This is the MW of the unprocessed precursor] CRC64: C2EF9074D14B9786 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MITIALFLVL LYFHDQLGYS AAQLQFGFYS ETCPSAESIV RDVVQQAVTN DPGKAAVLLR 

        70         80         90        100        110        120 
LQFHDCFVEG CDGSILIKHG GNDDERFAAG NAGVAGFDVI DEAKSELERF CPGVVSCADI 

       130        140        150        160        170        180 
VALAARDAIA EAKGPFYEVP TGRRDGLIAN VDHAKNLPDV QDSINTLKSK FREKGLSDQD 

       190        200        210        220        230        240 
LVLLSAGAHT IGTTACFFVI PRLDAQDPTI NPEFFQILRS KCPQGGDVNV RIPLDWDSQF 

       250        260        270        280        290        300 
VFDNQIFQNI KNGRGVILSD SVLYQDNNMK KIIDSYLETN QSSKANFAAD FTKAMIKMGA 

       310 
IGVKIGAEGE IRRLCSATN 

O49293 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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