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UniProtKB/Swiss-Prot entry P20334


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TNR9_MOUSE
Primary accession number P20334
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1991
Sequence was last modified on February 1, 1991 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 84)
Name and origin of the protein
Protein name Tumor necrosis factor receptor superfamily member 9 [Precursor]
Synonyms 4-1BB ligand receptor
T-cell antigen 4-1BB
CD137 antigen
Gene name
Name: Tnfrsf9
Synonyms: Cd137, Ila, Ly63
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1073/pnas.86.6.1963; PubMed=2784565 [NCBI, ExPASy, EBI, Israel, Japan]
Kwon B.S., Weissman S.M.;
"cDNA sequences of two inducible T-cell genes.";
Proc. Natl. Acad. Sci. U.S.A. 86:1963-1967(1989).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=BALB/c;
PubMed=8133039 [NCBI, ExPASy, EBI, Israel, Japan]
Kwon B.S., Kozak C.A., Kim K.K., Pickard R.T.;
"Genomic organization and chromosomal localization of the T-cell antigen 4-1BB.";
J. Immunol. 152:2256-2262(1994).
[3]
CHARACTERIZATION, AND PROTEIN SEQUENCE OF 24-29.
PubMed=7678621 [NCBI, ExPASy, EBI, Israel, Japan]
Pollok K.E., Kim Y.-J., Zhou Z., Hurtado J., Kin K.K., Pickard R.T., Kwon B.S.;
"Inducible T cell antigen 4-1BB. Analysis of expression and function.";
J. Immunol. 150:771-781(1993).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J04492; AAA40167.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U02567; AAA93113.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00118019; -.
PIR B32393; B32393.
RefSeq NP_001070977.1; -.
NP_035742.1; -.
UniGene Mm.244187
3D structure databases
PDB
1D0J; X-ray; 2.50 A; G/H/I/J/K=231-236.[ExPASy / RCSB / EBI]
PDBsum 1D0J; -.
ModBase P20334.
Protein-protein interaction databases
DIP DIP:1154N; -.
IntAct P20334; 4.
Organism-specific databases
MGI MGI:1101059; Tnfrsf9.
Gene expression databases
ArrayExpress P20334; -.
Bgee P20334; -.
GermOnline ENSMUSG00000028965; Mus musculus.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0004872; Molecular function: receptor activity (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001368; TNFR_Cys_rich_reg.
Graphical view of domain structure.
Pfam PF00020; TNFR_c6; 1.
Pfam graphical view of domain structure.
SMART SM00208; TNFR; 2.
SMART graphical view of domain structure.
PROSITE PS00652; TNFR_NGFR_1; 1.
PS50050; TNFR_NGFR_2; FALSE_NEG.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSMUSG00000028965; Mus musculus. [Contig view]
GeneID 21942; -.
Phylogenomic databases
HOGENOM P20334; -.
HOVERGEN P20334; -.
OMA P20334; CKQGQEL.
Other
NextBio 301576; -.
SOURCE Tnfrsf9; Mus musculus.
ProtoNet P20334.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Direct protein sequencing; Disulfide bond; Glycoprotein; Membrane; Receptor; Repeat; Signal; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    23  23      
CHAIN   24   256  233     Tumor necrosis factor receptor superfamily member 9. PRO_0000034578
TOPO_DOM   24   187  164     Extracellular (Potential). 
TRANSMEM   188   208  21     Potential. 
TOPO_DOM   209   256  48     Cytoplasmic (Potential). 
REPEAT   24    45  22     TNFR-Cys 1. 
REPEAT   46    85  40     TNFR-Cys 2. 
REPEAT   86   117  32     TNFR-Cys 3. 
REPEAT   118   159  42     TNFR-Cys 4. 
CARBOHYD   128   128        N-linked (GlcNAc...) (Potential). 
CARBOHYD   138   138        N-linked (GlcNAc...) (Potential). 
DISULFID   28    37        By similarity. 
DISULFID   31    44        By similarity. 
DISULFID   47    61        By similarity. 
DISULFID   64    77        By similarity. 
DISULFID   67    85        By similarity. 
DISULFID   87    93        By similarity. 
DISULFID   98   105        By similarity. 
DISULFID   101   116        By similarity. 
DISULFID   119   133        By similarity. 
DISULFID   139   158        By similarity. 
Sequence information
Length: 256 AA [This is the length of the unprocessed precursor] Molecular weight: 27598 Da [This is the MW of the unprocessed precursor] CRC64: 93A10D03C60813C4 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGNNCYNVVV IVLLLVGCEK VGAVQNSCDN CQPGTFCRKY NPVCKSCPPS TFSSIGGQPN 

        70         80         90        100        110        120 
CNICRVCAGY FRFKKFCSST HNAECECIEG FHCLGPQCTR CEKDCRPGQE LTKQGCKTCS 

       130        140        150        160        170        180 
LGTFNDQNGT GVCRPWTNCS LDGRSVLKTG TTEKDVVCGP PVVSFSPSTT ISVTPEGGPG 

       190        200        210        220        230        240 
GHSLQVLTLF LALTSALLLA LIFITLLFSV LKWIRKKFPH IFKQPFKKTT GAAQEEDACS 

       250 
CRCPQEEEGG GGGYEL 

P20334 in FASTA format

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