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UniProtKB/Swiss-Prot entry P21913


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_RAT
Primary accession number P21913
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 1991
Sequence was last modified on May 1, 1991 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 73)
Name and origin of the protein
Protein name Succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Fragment]
Synonyms EC 1.3.5.1
Iron-sulfur subunit of complex II
Ip
Gene name
Name: Sdhb
Synonyms: Sdh1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE.
PubMed=2494655 [NCBI, ExPASy, EBI, Israel, Japan]
Gould S.J., Subramani S., Scheffler I.E.;
"Use of the DNA polymerase chain reaction for homology probing: isolation of partial cDNA or genomic clones encoding the iron-sulfur protein of succinate dehydrogenase from several species.";
Proc. Natl. Acad. Sci. U.S.A. 86:1934-1938(1989).
[2]
ERRATUM.
Gould S.J., Subramani S., Scheffler I.E.;
Proc. Natl. Acad. Sci. U.S.A. 90:2556-2556(1993).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
PIR B32394; B32394.
UniGene Rn.3902
3D structure databases
HSSP P07014; 1NEK. [HSSP ENTRY / PDB]
SMR P21913; 1-143.
ModBase P21913.
Organism-specific databases
RGD 1308598; Sdhb.
Gene expression databases
ArrayExpress P21913; -.
GermOnline ENSRNOG00000007967; Rattus norvegicus.
Ontologies
GO
GO:0005743; Cellular component: mitochondrial inner membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0008177; Molecular function: succinate dehydrogenase (ubiquinone) activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; PARTIAL.
PS51085; 2FE2S_FER_2; PARTIAL.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P21913.
Genome annotation databases
Ensembl ENSRNOG00000007967; Rattus norvegicus. [Contig view]
Phylogenomic databases
HOVERGEN P21913; -.
Other
ProtoNet P21913.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Mitochondrion; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   <1   >143  >143     Succinate dehydrogenase [ubiquinone] iron-sulfur subunit. PRO_0000158693
DOMAIN   <1     27  >27     2Fe-2S ferredoxin-type. 
DOMAIN   70    100  31     4Fe-4S ferredoxin-type. 
METAL   7      7        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   80     80        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   83     83        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   86     86        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   90     90        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   137    137        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   143    143        Iron-sulfur 3 (3Fe-4S) (By similarity). 
NON_TER   1      1         
NON_TER   143    143         
Sequence information
Length: 143 AA [This is the length of the partial sequence of the unprocessed precursor] Molecular weight: 16788 Da [This is the MW of the partial sequence of the unprocessed precursor] CRC64: CB9D59670007BC3A [This is a checksum on the sequence]
        10         20         30         40         50         60 
GGNTLACTRR IDTNLNKVSK IYPLPHMYVI KDLVPDLSNF YAQYRSIEPY LKKKDESQEG 

        70         80         90        100        110        120 
KQQYLQSIEE REKLDGLYEC ILCACCSTSC PSYWWNGDKY LGPAVLMQAY RWMIDSRDDF 

       130        140 
TEERLAKLQD PFSLYRCHTI MNC 

P21913 in FASTA format

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