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UniProtKB/Swiss-Prot entry P24549


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name AL1A1_MOUSE
Primary accession number P24549
Secondary accession numbers Q7TQJ0 Q811J0
Integrated into Swiss-Prot on March 1, 1992
Sequence was last modified on January 23, 2007 (Sequence version 5)
Annotations were last modified on    July 22, 2008 (Entry version 88)
Name and origin of the protein
Protein name Retinal dehydrogenase 1
Synonyms RALDH 1
RalDH1
EC 1.2.1.36
Aldehyde dehydrogenase family 1 member A1
Aldehyde dehydrogenase, cytosolic
ALHDII
ALDH-E1
Gene name
Name: Aldh1a1
Synonyms: Ahd-2, Ahd2, Aldh1
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=BALB/c, and C57BL/6;
TISSUE=Liver;
DOI=10.1016/0378-1119(91)90421-7; PubMed=2055490 [NCBI, ExPASy, EBI, Israel, Japan]
Rongnoparut P., Weaver S.;
"Isolation and characterization of a cytosolic aldehyde dehydrogenase-encoding cDNA from mouse liver.";
Gene 101:261-265(1991).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=129/ReJ, BALB/c, and C57BL/6J;
TISSUE=Liver;
DOI=10.1006/bmmb.1994.1048; PubMed=7993664 [NCBI, ExPASy, EBI, Israel, Japan]
Bond S.L., Singh S.M.;
"DNA sequence analysis of the cytosolic acetaldehyde dehydrogenase gene (Ahd-2) in mouse strains with variable ethanol preferences.";
Biochem. Med. Metab. Biol. 52:155-159(1994).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=FVB/N;
TISSUE=Colon, and Liver;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PROTEIN SEQUENCE OF 23-52; 140-156; 211-230; 309-320; 330-349; 400-410; 421-435 AND 477-490.
TISSUE=Embryonic retina;
PubMed=1935685 [NCBI, ExPASy, EBI, Israel, Japan]
McCaffery P., Tempst P., Lara G., Drager U.C.;
"Aldehyde dehydrogenase is a positional marker in the retina.";
Development 112:693-702(1991).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M74570; AAA37202.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M74571; AAA37203.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S75713; AAB32754.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S77047; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
BC044729; AAH44729.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC054386; AAH54386.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JQ1004; JQ1004.
RefSeq NP_038495.2; -.
UniGene Mm.457973
3D structure databases
HSSP P51977; 1BXS. [HSSP ENTRY / PDB]
ModBase P24549.
Protein-protein interaction databases
IntAct P24549; -.
PTM databases
PhosphoSite P24549; -.
2D gel databases
SWISS-2DPAGE P24549; -.
REPRODUCTION-2DPAGE P24549; -.
Organism-specific databases
MGI MGI:1353450; Aldh1a1.
Gene expression databases
ArrayExpress P24549; -.
CleanEx MM_ALDH1A1; -.
GermOnline ENSMUSG00000053279; Mus musculus.
Ontologies
GO
GO:0004028; Molecular function: 3-chloroallyl aldehyde dehydrogenase activity (inferred from direct assay from MGI).
GO:0048048; Biological process: embryonic eye morphogenesis (inferred from genetic interaction from MGI).
GO:0002072; Biological process: optic cup morphogenesis involved in camera-type eye development (inferred from genetic interaction from MGI).
GO:0043065; Biological process: positive regulation of apoptosis (inferred from genetic interaction from MGI).
GO:0042573; Biological process: retinoic acid metabolic process (inferred from mutant phenotype from MGI).
QuickGo view.
Family and domain databases
InterPro IPR016160; Ald_DHase_CS.
IPR016162; Ald_DHase_N.
IPR015590; Aldehyde_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.605.10; Aldehyde_dehydrogenase_N; 1.
PANTHER PTHR11699; Aldehyde_dehyd; 1.
Pfam PF00171; Aldedh; 1.
Pfam graphical view of domain structure.
PROSITE PS00070; ALDEHYDE_DEHYDR_CYS; 1.
PS00687; ALDEHYDE_DEHYDR_GLU; 1.
BLOCKS P24549.
Genome annotation databases
Ensembl ENSMUSG00000053279; Mus musculus. [Contig view]
GeneID 11668; -.
KEGG mmu:11668; -.
Phylogenomic databases
HOGENOM P24549; -.
HOVERGEN P24549; -.
Other
SOURCE Aldh1a1; Mus musculus.
ProtoNet P24549.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acetylation; Cytoplasm; Direct protein sequencing; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed (By similarity). 
CHAIN   2   501  500     Retinal dehydrogenase 1. PRO_0000056417
NP_BIND   246   251  6     NAD (By similarity). 
REGION   300   305  6     Antabuse binding. 
ACT_SITE   269   269        Proton acceptor (By similarity). 
ACT_SITE   303   303        Nucleophile (By similarity). 
SITE   170   170  1     Transition state stabilizer (By similarity). 
MOD_RES   2     2        N-acetylserine (By similarity). 
CONFLICT   8     8        A -> R (in Ref. 1; AAA37202/AAA37203). 
CONFLICT   45    45        T -> S (in Ref. 2; AAB32754). 
CONFLICT   51    51        H -> Q (in Ref. 2; AAB32754). 
CONFLICT   87    87        R -> C (in Ref. 1; AAA37202). 
CONFLICT   140   140        I -> Y (in Ref. 4; AA sequence). 
CONFLICT   458   458        M -> I (in Ref. 1; AAA37202). 
Sequence information
Length: 501 AA [This is the length of the unprocessed precursor] Molecular weight: 54468 Da [This is the MW of the unprocessed precursor] CRC64: 0E428151B799BD1D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSSPAQPAVP APLADLKIQH TKIFINNEWH NSVSGKKFPV LNPATEEVIC HVEEGDKADV 

        70         80         90        100        110        120 
DKAVKAARQA FQIGSPWRTM DASERGRLLN KLADLMERDR LLLATMEALN GGKVFANAYL 

       130        140        150        160        170        180 
SDLGGCIKAL KYCAGWADKI HGQTIPSDGD IFTYTRREPI GVCGQIIPWN FPMLMFIWKI 

       190        200        210        220        230        240 
GPALSCGNTV VVKPAEQTPL TALHLASLIK EAGFPPGVVN IVPGYGPTAG AAISSHMDVD 

       250        260        270        280        290        300 
KVAFTGSTQV GKLIKEAAGK SNLKRVTLEL GGKSPCIVFA DADLDIAVEF AHHGVFYHQG 

       310        320        330        340        350        360 
QCCVAASRIF VEESVYDEFV KRSVERAKKY VLGNPLTPGI NQGPQIDKEQ HDKILDLIES 

       370        380        390        400        410        420 
GKKEGAKLEC GGGRWGNKGF FVQPTVFSNV TDEMRIAKEE IFGPVQQIMK FKSVDDVIKR 

       430        440        450        460        470        480 
ANNTTYGLAA GLFTKDLDKA ITVSSALQAG VVWVNCYMML SAQCPFGGFK MSGNGRELGE 

       490        500 
HGLYEYTELK TVAMKISQKN S 

P24549 in FASTA format

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