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UniProtKB/Swiss-Prot entry P26353


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HMP_SALTY
Primary accession number P26353
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 1992
Sequence was last modified on January 23, 2002 (Sequence version 3)
Annotations were last modified on    November 25, 2008 (Entry version 82)
Name and origin of the protein
Protein name Flavohemoprotein
Synonyms Hemoglobin-like protein
Flavohemoglobin
Nitric oxide dioxygenase
NO oxygenase
NOD
EC 1.14.12.17
Gene name
Name: hmp
Synonyms: frsB, hmpA
OrderedLocusNames: STM2556
From
Salmonella typhimurium [TaxID: 602] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND ROLE IN RESISTANCE TO NITRIC OXIDE.
STRAIN=ATCC 14028 / SGSG 2980 / CDC 6516-60 / NCTC 12023;
DOI=10.1074/jbc.273.20.12543; PubMed=9575213 [NCBI, ExPASy, EBI, Israel, Japan]
Crawford M.J., Goldberg D.E.;
"Role for the Salmonella flavohemoglobin in protection from nitric oxide.";
J. Biol. Chem. 273:12543-12547(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LT2 / SGSC1412 / ATCC 700720;
DOI=10.1038/35101614; PubMed=11677609 [NCBI, ExPASy, EBI, Israel, Japan]
McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E., Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R., Wilson R.K.;
"Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
Nature 413:852-856(2001).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-29.
STRAIN=LT2;
PubMed=2134182 [NCBI, ExPASy, EBI, Israel, Japan]
Steiert J.G., Urbanowski M.L., Stauffer L.T., Plamann M.D., Stauffer G.V.;
"Nucleotide sequence of the Salmonella typhimurium glyA gene.";
DNA Seq. 1:107-113(1990).
[4]
INDUCTION.
DOI=10.1074/jbc.273.51.34028; PubMed=9852058 [NCBI, ExPASy, EBI, Israel, Japan]
Crawford M.J., Goldberg D.E.;
"Regulation of the Salmonella typhimurium flavohemoglobin gene. A new pathway for bacterial gene expression in response to nitric oxide.";
J. Biol. Chem. 273:34028-34032(1998).
[5]
ROLE IN NITRIC OXIDE DETOXIFICATION.
DOI=10.1128/IAI.70.8.4399-4405.2002; PubMed=12117950 [NCBI, ExPASy, EBI, Israel, Japan]
Stevanin T.M., Poole R.K., Demoncheaux E.A.G., Read R.C.;
"Flavohemoglobin Hmp protects Salmonella enterica serovar typhimurium from nitric oxide-related killing by human macrophages.";
Infect. Immun. 70:4399-4405(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF020388; AAC24484.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE008816; AAL21450.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X15816; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
PIR A48427; A48427.
RefSeq NP_461491.1; -.
3D structure databases
HSSP P24232; 1GVH. [HSSP ENTRY / PDB]
SMR P26353; 1-396.
ModBase P26353.
Enzyme and pathway databases
BioCyc STYP99287:STM2556-MON; -.
Organism-specific databases
StyGene SG10170; hmp.
Ontologies
GO
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0008941; Molecular function: nitric oxide dioxygenase activity (inferred from electronic annotation from HAMAP).
GO:0019825; Molecular function: oxygen binding (inferred from electronic annotation from InterPro).
GO:0005344; Molecular function: oxygen transporter activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0015671; Biological process: oxygen transport (inferred from electronic annotation from HAMAP).
GO:0009636; Biological process: response to toxin (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01252; -; 1.
PBIL [Tree]
InterPro IPR001709; FPN_cyt_redctse.
IPR012292; Globin.
IPR000971; Globin_subset.
IPR008333; OxRdtase_FAD-bd.
IPR001433; OxRdtase_FAD/NAD_bd.
IPR001221; Phe_hydroxylase.
Graphical view of domain structure.
Gene3D G3DSA:1.10.490.10; Globin_related; 1.
Pfam PF00970; FAD_binding_6; 1.
PF00042; Globin; 1.
PF00175; NAD_binding_1; 1.
Pfam graphical view of domain structure.
PRINTS PR00371; FPNCR.
PR00410; PHEHYDRXLASE.
PROSITE PS51384; FAD_FR; 1.
PS01033; GLOBIN; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P26353.
Genome annotation databases
GeneID 1254078; -.
GenomeReviews AE006468_GR; STM2556.
KEGG stm:STM2556; -.
NMPDR fig|99287.1.peg.2470; -.
Phylogenomic databases
HOGENOM P26353; -.
Genome annotation databases
CMR P26353; STM2556.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Detoxification; FAD; Flavoprotein; Heme; Iron; Metal-binding; NAD; NADP; Oxidoreductase; Oxygen transport; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   396  396     Flavohemoprotein. PRO_0000052447
DOMAIN   150   255  106     FAD-binding FR-type. 
NP_BIND   204   207  4     FAD (By similarity). 
NP_BIND   268   273  6     NADP (By similarity). 
NP_BIND   389   392  4     FAD (By similarity). 
REGION   1   138  138     Globin. 
REGION   147   396  250     Reductase. 
REGION   259   396  138     NAD or NADP-binding. 
ACT_SITE   95    95        Charge relay system (By similarity). 
ACT_SITE   135   135        Charge relay system (By similarity). 
METAL   85    85        Iron (heme proximal ligand) (By similarity). 
BINDING   188   188        FAD (By similarity). 
SITE   29    29  1     Involved in heme-bound ligand stabilization and O-O bond activation (By similarity). 
SITE   84    84  1     Influences the redox potential of the prosthetic heme and FAD groups (By similarity). 
SITE   388   388  1     Influences the redox potential of the prosthetic heme and FAD groups (By similarity). 
CONFLICT   202   203        EI -> VF (in Ref. 1; AAC24484). 
CONFLICT   242   242        G -> V (in Ref. 1; AAC24484). 
CONFLICT   330   330        S -> A (in Ref. 1; AAC24484). 
Sequence information
Length: 396 AA [This is the length of the unprocessed precursor] Molecular weight: 43992 Da [This is the MW of the unprocessed precursor] CRC64: 90D0FBCB239C87C5 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLDAQTIATV KATIPLLVET GPKLTAHFYD RMFTHNPELK EIFNMSNQRN GDQREALFNA 

        70         80         90        100        110        120 
IAAYASNIEN LPALLPAVEK IAQKHTSFQI KPEQYNIVGT HLLATLDEMF NPGQEVLDAW 

       130        140        150        160        170        180 
GKAYGVLANV FIHREAEIYH ENASKDGGWE GTRPFRIVAK TPRSALITSF EFEPVDGGTV 

       190        200        210        220        230        240 
AEYRPGQYLG VWLKPEGFAH QEIRQYSLTR KPDGKGYRIA VKREDGGQVS NWLHHHASVG 

       250        260        270        280        290        300 
DGVHLAAPAG DFFMNVAADT PVSLISAGVG QTPMLAMLDT LAKEQHTAQV NWFHAAENGD 

       310        320        330        340        350        360 
VHAFADEVSE LGRTLPRFTA HTWYREPTES DRAQRLFDSE GLMDLSKLEA AISDPAMQFY 

       370        380        390 
LCGPVGFMQF AAKQLVSLGV NNENIHYECF GPHKVL 

P26353 in FASTA format

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