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UniProtKB/Swiss-Prot entry P28300


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LYOX_HUMAN
Primary accession number P28300
Secondary accession number Q5FWF0
Integrated into Swiss-Prot on December 1, 1992
Sequence was last modified on October 1, 1993 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 88)
Name and origin of the protein
Protein name Protein-lysine 6-oxidase [Precursor]
Synonyms EC 1.4.3.13
Lysyl oxidase
Gene name
Name: LOX
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1016/0888-7543(91)90057-L; PubMed=1685472 [NCBI, ExPASy, EBI, Israel, Japan]
Haemaelaeinen E.-R., Jones T.A., Sheer D., Taskinen K., Pihlajaniemi T., Kivirikko K.I.;
"Molecular cloning of human lysyl oxidase and assignment of the gene to chromosome 5q23.3-31.2.";
Genomics 11:508-516(1991).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Skin;
PubMed=1357535 [NCBI, ExPASy, EBI, Israel, Japan]
Mariani T.J., Trackman P.C., Kagan H.M., Eddy R.L., Shows T.B., Boyd C.D., Deak S.B.;
"The complete derived amino acid sequence of human lysyl oxidase and assignment of the gene to chromosome 5 (extensive sequence homology with the murine ras recision gene).";
Matrix 12:242-248(1992).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
DOI=10.1074/jbc.270.13.7176; PubMed=7706256 [NCBI, ExPASy, EBI, Israel, Japan]
Kim Y., Boyd C.D., Csiszar K.;
"A new gene with sequence and structural similarity to the gene encoding human lysyl oxidase.";
J. Biol. Chem. 270:7176-7182(1995).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1023/A:1006913122261; PubMed=10391127 [NCBI, ExPASy, EBI, Israel, Japan]
Contente S., Kenyon K., Sriraman P., Subramanyan S., Friedman R.M.;
"Epigenetic inhibition of lysyl oxidase transcription after transformation by ras oncogene.";
Mol. Cell. Biochem. 194:79-91(1999).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-213.
DOI=10.1006/geno.1993.1369; PubMed=7902322 [NCBI, ExPASy, EBI, Israel, Japan]
Haemaelaeinen E.-R., Kemppainen R., Pihlajaniemi T., Kivirikko K.I.;
"Structure of the human lysyl oxidase gene.";
Genomics 17:544-548(1993).
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 55-216.
TISSUE=Blood;
PubMed=1352776 [NCBI, ExPASy, EBI, Israel, Japan]
Svinarich D.M., Twomey T.A., Macauley S.P., Krebs C.J., Yang T.P., Krawetz S.A.;
"Characterization of the human lysyl oxidase gene locus.";
J. Biol. Chem. 267:14382-14387(1992).
[8]
DISEASE.
PubMed=9111998 [NCBI, ExPASy, EBI, Israel, Japan]
Khakoo A., Thomas R., Trompeter R., Duffy P., Price R., Pope F.M.;
"Congenital cutis laxa and lysyl oxidase deficiency.";
Clin. Genet. 51:109-114(1997).
[9]
VARIANT GLN-158.
DOI=10.1006/geno.1993.1203; PubMed=8100215 [NCBI, ExPASy, EBI, Israel, Japan]
Csiszar K., Mariani T.J., Gosin J.S., Deak S.B., Boyd C.D.;
"A restriction fragment length polymorphism results in a nonconservative amino acid substitution encoded within the first exon of the human lysyl oxidase gene.";
Genomics 16:401-406(1993).
Comments
  • FUNCTION: Responsible for the post-translational oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. In addition to cross-linking of extracellular matrix proteins, may have a direct role in tumor suppression.
  • CATALYTIC ACTIVITY: Peptidyl-L-lysyl-peptide + O2 + H2O = peptidyl-allysyl-peptide + NH3 + H2O2.
  • COFACTOR: Copper.
  • COFACTOR: Contains 1 lysine tyrosylquinone (By similarity).
  • SUBCELLULAR LOCATION: Secreted, extracellular space.
  • TISSUE SPECIFICITY: Heart, placenta, skeletal muscle, kidney, lung and pancreas.
  • PTM: The lysine tyrosylquinone cross-link (LTQ) is generated by condensation of the epsilon-amino group of a lysine with a topaquinone produced by oxidation of tyrosine.
  • DISEASE: Defects in LOX may be a cause of autosomal recessive cutis laxa type I (CL type I) [MIM:219100].
  • MISCELLANEOUS: The propeptide plays a role in directing the deposition of this enzyme to elastic fibers, via interaction with tropoelastin (By similarity).
  • SIMILARITY: Belongs to the lysyl oxidase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
S78694; AAB21243.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M94054; AAA59525.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S45875; AAB23549.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF039291; AAD02130.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC074820; AAH74820.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC074872; AAH74872.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC089436; AAH89436.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L16895; AAA16870.1; -; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M84150; AAA59541.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A47529; OXHUL.
RefSeq NP_002308.2; -.
UniGene Hs.102267
3D structure databases
ModBase P28300.
Organism-specific databases
H-InvDB HIX0031956; -.
HGNC HGNC:6664; LOX.
GenAtlas LOX.
MIM 153455; gene. [NCBI / EBI]
219100; phenotype. [NCBI / EBI]
Orphanet 209; Cutis laxa.
PharmGKB PA30427; -.
GeneCards P28300.
Gene expression databases
ArrayExpress P28300; -.
CleanEx HS_LOX; -.
GermOnline ENSG00000113083; Homo sapiens.
Ontologies
GO
GO:0005507; Molecular function: copper ion binding (traceable author statement from ProtInc).
GO:0004720; Molecular function: protein-lysine 6-oxidase activity (traceable author statement from ProtInc).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006464; Biological process: protein modification process (traceable author statement from ProtInc).
GO:0007169; Biological process: transmembrane receptor protein tyrosine kinase signaling pathway (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR001695; Lysyl_oxidase.
Graphical view of domain structure.
Pfam PF01186; Lysyl_oxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00074; LYSYLOXIDASE.
PROSITE PS00926; LYSYL_OXIDASE; 1.
ProtoNet P28300.
Proteomic databases
PeptideAtlas P28300; -.
Genome annotation databases
Ensembl ENSG00000113083; Homo sapiens. [Contig view]
GeneID 4015; -.
KEGG hsa:4015; -.
Phylogenomic databases
HOGENOM P28300; -.
HOVERGEN P28300; -.
Other
NextBio 15752; -.
SOURCE LOX; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Copper; Glycoprotein; LTQ; Metal-binding; Oxidoreductase; Polymorphism; Secreted; Signal; TPQ.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    21  21     Potential. 
PROPEP   22   168  147     By similarity. PRO_0000018520
CHAIN   169   417  249     Protein-lysine 6-oxidase. PRO_0000018521
REGION   213   417  205     Lysyl-oxidase like. 
METAL   292   292        Copper (Potential). 
METAL   294   294        Copper (Potential). 
METAL   296   296        Copper (Potential). 
MOD_RES   355   355        2',4',5'-topaquinone (By similarity). 
CARBOHYD   81    81        N-linked (GlcNAc...) (Potential). 
CARBOHYD   97    97        N-linked (GlcNAc...) (Potential). 
CARBOHYD   144   144        N-linked (GlcNAc...) (Potential). 
CROSSLNK   320   355        Lysine tyrosylquinone (Lys-Tyr) (By similarity). 
VARIANT   158   158  1     R -> Q (in dbSNP:rs1800449 [NCBI]). VAR_004282 
CONFLICT   30    30        Q -> H (in Ref. 3). 
CONFLICT   31    31        P -> A (in Ref. 3). 
CONFLICT   95    95        R -> A (in Ref. 3). 
CONFLICT   102   102        A -> G (in Ref. 1; AAB21243). 
CONFLICT   137   137        A -> R (in Ref. 2; AAA59525/AAB23549). 
CONFLICT   139   139        A -> P (in Ref. 1; AAB21243). 
CONFLICT   304   305        YD -> LY (in Ref. 1; AAB21243). 
CONFLICT   315   315        V -> W (in Ref. 1; AAB21243). 
Sequence information
Length: 417 AA [This is the length of the unprocessed precursor] Molecular weight: 46944 Da [This is the MW of the unprocessed precursor] CRC64: 6412A78443E03F04 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRFAWTVLLL GPLQLCALVH CAPPAAGQQQ PPREPPAAPG AWRQQIQWEN NGQVFSLLSL 

        70         80         90        100        110        120 
GSQYQPQRRR DPGAAVPGAA NASAQQPRTP ILLIRDNRTA AARTRTAGSS GVTAGRPRPT 

       130        140        150        160        170        180 
ARHWFQAGYS TSRAREAGAS RAENQTAPGE VPALSNLRPP SRVDGMVGDD PYNPYKYSDD 

       190        200        210        220        230        240 
NPYYNYYDTY ERPRPGGRYR PGYGTGYFQY GLPDLVADPY YIQASTYVQK MSMYNLRCAA 

       250        260        270        280        290        300 
EENCLASTAY RADVRDYDHR VLLRFPQRVK NQGTSDFLPS RPRYSWEWHS CHQHYHSMDE 

       310        320        330        340        350        360 
FSHYDLLDAN TQRRVAEGHK ASFCLEDTSC DYGYHRRFAC TAHTQGLSPG CYDTYGADID 

       370        380        390        400        410 
CQWIDITDVK PGNYILKVSV NPSYLVPESD YTNNVVRCDI RYTGHHAYAS GCTISPY 

P28300 in FASTA format

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