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UniProtKB/Swiss-Prot entry P29643


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name COX1_AMICA
Primary accession number P29643
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on April 1, 1993 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 55)
Name and origin of the protein
Protein name Cytochrome c oxidase subunit 1 [Fragment]
Synonyms EC 1.9.3.1
Cytochrome c oxidase polypeptide I
Gene name
Name: mt-co1
Synonyms: coi, coxi, mtco1
From
Amia calva (Bowfin) [TaxID: 7924] 
Encoded on Mitochondrion.
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Amiiformes; Amiidae; Amia.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1663569 [NCBI, ExPASy, EBI, Israel, Japan]
Normark B.B., McCune A.R., Harrison R.G.;
"Phylogenetic relationships of neopterygian fishes, inferred from mitochondrial DNA sequences.";
Mol. Biol. Evol. 8:819-834(1991).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M64885; AAB01437.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
SMR P29643; 1-188.
ModBase P29643.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from InterPro).
GO:0005746; Cellular component: mitochondrial respiratory chain (inferred from electronic annotation from UniProtKB-KW).
GO:0005507; Molecular function: copper ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004129; Molecular function: cytochrome-c oxidase activity (inferred from electronic annotation from EC).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0009060; Biological process: aerobic respiration (inferred from electronic annotation from InterPro).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000883; COX1.
Graphical view of domain structure.
Gene3D G3DSA:1.20.210.10; COX1; 1.
PANTHER PTHR10422; COX1; 1.
Pfam PF00115; COX1; 1.
Pfam graphical view of domain structure.
PRINTS PR01165; CYCOXIDASEI.
PROSITE PS50855; COX1; 1.
PS00077; COX1_CUB; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P29643.
Phylogenomic databases
HOVERGEN P29643; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Copper; Electron transport; Heme; Iron; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Respiratory chain; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   <1   >188  >188     Cytochrome c oxidase subunit 1. PRO_0000183280
TRANSMEM   3     23  21     Potential. 
TRANSMEM   37     57  21     Potential. 
TRANSMEM   81    101  21     Potential. 
TRANSMEM   107    127  21     Potential. 
TRANSMEM   149    169  21     Potential. 
METAL   9      9        Copper B (Probable). 
METAL   13     13        Copper B (Probable). 
METAL   59     59        Copper B (Probable). 
METAL   60     60        Copper B (Probable). 
METAL   145    145        Iron (heme A3 axial ligand) (Probable). 
CROSSLNK   9     13        1'-histidyl-3'-tyrosine (His-Tyr) (By similarity). 
NON_TER   1      1         
NON_TER   188    188         
Sequence information
Length: 188 AA [This is the length of the partial sequence of the unprocessed precursor] Molecular weight: 21093 Da [This is the MW of the partial sequence of the unprocessed precursor] CRC64: 64C1E7674CEDB580 [This is a checksum on the sequence]
        10         20         30         40         50         60 
QHLFWFFGHP EVYILILPGF GMVSHIVAYY AGKKEPFGYM GMVWAMMAIG LLGFIVWAHH 

        70         80         90        100        110        120 
MFTVGMDVDT RAYFTSATMV IAIPTGVKVF SWLATLHGGA IKWETPLLWA LGFIFLFTVG 

       130        140        150        160        170        180 
GLTGIVLANS SLDIVLHDTY YVVAHFHYVL SMGAVFAIMG GFVHWFPLFS GYTLHPTWSK 


IHFGVMFV 

P29643 in FASTA format

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