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UniProtKB/Swiss-Prot entry P29913


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NQO1_PARDE
Primary accession number P29913
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on April 1, 1993 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 53)
Name and origin of the protein
Protein name NADH-quinone oxidoreductase chain 1
Synonyms EC 1.6.99.5
NADH dehydrogenase I, chain 1
NDH-1, chain 1
Gene name
Name: nqo1
From
Paracoccus denitrificans [TaxID: 266] 
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-37.
STRAIN=ATCC 13543 / NRRL B-3784;
DOI=10.1021/bi00240a012; PubMed=1905152 [NCBI, ExPASy, EBI, Israel, Japan]
Xu X., Matsuno-Yagi A., Yagi T.;
"The NADH-binding subunit of the energy-transducing NADH-ubiquinone oxidoreductase of Paracoccus denitrificans: gene cloning and deduced primary structure.";
Biochemistry 30:6422-6428(1991).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-8, AND PROTEIN SEQUENCE OF 1-37 AND 194-203.
STRAIN=ATCC 13543 / NRRL B-3784;
DOI=10.1021/bi00099a027; PubMed=1909571 [NCBI, ExPASy, EBI, Israel, Japan]
Xu X., Matsuno-Yagi A., Yagi T.;
"Characterization of the 25-kilodalton subunit of the energy-transducing NADH-ubiquinone oxidoreductase of Paracoccus denitrificans: sequence similarity to the 24-kilodalton subunit of the flavoprotein fraction of mammalian complex I.";
Biochemistry 30:8678-8684(1991).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 416-431.
DOI=10.1016/0003-9861(92)90542-5; PubMed=1605643 [NCBI, ExPASy, EBI, Israel, Japan]
Xu X., Matsuno-Yagi A., Yagi T.;
"Structural features of the 66-kDa subunit of the energy-transducing NADH-ubiquinone oxidoreductase (NDH-1) of Paracoccus denitrificans.";
Arch. Biochem. Biophys. 296:40-48(1992).
Comments
  • FUNCTION: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  • CATALYTIC ACTIVITY: NADH + quinone = NAD+ + quinol.
  • COFACTOR: Binds 1 FMN (Potential).
  • COFACTOR: Binds 1 4Fe-4S cluster (Potential).
  • SUBUNIT: NDH-1 is composed of at least 14 different subunits, nqo1 to nqo14. The complex has a L-shaped structure, with the hydrophobic arm (subunits nqo7, nqo8, nqo10 to nqo14) embedded in the inner membrane and the hydrophilic peripheral arm (subunits nqo1 to nqo6, nqo9) protruding into the bacterial cytoplasm. The hydrophilic domain contains all the redox centers.
  • SUBCELLULAR LOCATION: Cell inner membrane; Peripheral membrane protein.
  • SIMILARITY: Belongs to the complex I 51 kDa subunit family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M64432; AAA25585.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A39588; A39588.
3D structure databases
ModBase P29913.
Family and domain databases
InterPro IPR001949; NADH-ubq_OxRdtase_51KDa_CS.
IPR011538; NADH-UbQ_OxRdtase_51KDa_su.
IPR011537; NADH-UbQ_OxRdtase_F_su.
Graphical view of domain structure.
Pfam PF01512; Complex1_51K; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01959; nuoF_fam; 1.
PROSITE PS00644; COMPLEX1_51K_1; 1.
PS00645; COMPLEX1_51K_2; 1.
BLOCKS P29913.
Other
ProtoNet P29913.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
4Fe-4S; Cell inner membrane; Cell membrane; Direct protein sequencing; Flavoprotein; FMN; Iron; Iron-sulfur; Membrane; Metal-binding; NAD; Oxidoreductase; Quinone; Ubiquinone.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   431  431     NADH-quinone oxidoreductase chain 1. PRO_0000118566
NP_BIND   54    63  10     NAD (By similarity). 
NP_BIND   167   214  48     FMN (By similarity). 
METAL   346   346        Iron-sulfur (4Fe-4S) (Potential). 
METAL   349   349        Iron-sulfur (4Fe-4S) (Potential). 
METAL   352   352        Iron-sulfur (4Fe-4S) (Potential). 
METAL   392   392        Iron-sulfur (4Fe-4S) (Potential). 
Sequence information
Length: 431 AA [This is the length of the unprocessed precursor] Molecular weight: 47191 Da [This is the MW of the unprocessed precursor] CRC64: AA25C5A0A7570048 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLNDQDRIFT NLYGMGDRSL AGAKKRGHWD GTAAIIQRGR DKIIDEMKAS GLRGRGGAGF 

        70         80         90        100        110        120 
PTGMKWSFMP KESDGRPSYL VINADESEPA TCKDREIMRH DPHTLIEGAL IASFAMGAHA 

       130        140        150        160        170        180 
AYIYIRGEFI REREALQAAI DECYDAGLLG RNAAGSGWDF DLYLHHGAGA YICGEETALL 

       190        200        210        220        230        240 
ESLEGKKGMP RMKPPFPAGA GLYGCPTTVN NVESIAVVPT ILRRGAEWFA SFGRPNNAGV 

       250        260        270        280        290        300 
KLFGLTGHVN TPCVVEEAMS IPMRELIEKH GGGIRGGWKN LKAVIPGGAS CPVLTAEQCE 

       310        320        330        340        350        360 
NAIMDYDGMR DVRSSFGTAC MIVMDQSTDV VKAIWRLSKF FKHESCGQCT PCREGTGWMM 

       370        380        390        400        410        420 
RVMERLVRGD AEVEEIDMLF DVTKQVEGHT ICALGDAAAW PIQGLIRNFR EEIEDRIKAK 

       430 
RTGRMGAMAA E 

P29913 in FASTA format

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