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UniProtKB/Swiss-Prot entry P35571


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GPDM_RAT
Primary accession number P35571
Secondary accession numbers None
Integrated into Swiss-Prot on June 1, 1994
Sequence was last modified on June 1, 1994 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 72)
Name and origin of the protein
Protein name Glycerol-3-phosphate dehydrogenase, mitochondrial [Precursor]
Synonyms GPDH-M
GPD-M
EC 1.1.99.5
Gene name
Name: Gpd2
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 43-58.
STRAIN=Sprague-Dawley;
TISSUE=Testis;
PubMed=8182039 [NCBI, ExPASy, EBI, Israel, Japan]
Brown L.J., McDonald M.J., Lehn D.A., Moran S.M.;
"Sequence of rat mitochondrial glycerol-3-phosphate dehydrogenase cDNA. Evidence for EF-hand calcium-binding domains.";
J. Biol. Chem. 269:14363-14366(1994).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Wistar;
TISSUE=Liver;
PubMed=7937996 [NCBI, ExPASy, EBI, Israel, Japan]
Mueller S., Seitz H.J.;
"Cloning of a cDNA for the FAD-linked glycerol-3-phosphate dehydrogenase from rat liver and its regulation by thyroid hormones.";
Proc. Natl. Acad. Sci. U.S.A. 91:10581-10585(1994).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U08027; AAB60443.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X78593; CAA55329.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC083565; AAH83565.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A54051; A54051.
RefSeq NP_036868.1; -.
UniGene Rn.89705
3D structure databases
HSSP P02593; 1CDM. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
ModBase P35571.
PTM databases
PhosphoSite P35571; -.
Organism-specific databases
RGD 2726; Gpd2.
Gene expression databases
ArrayExpress P35571; -.
Ontologies
GO
GO:0009331; Cellular component: glycerol-3-phosphate dehydrogenase complex (inferred from electronic annotation from InterPro).
GO:0005739; Cellular component: mitochondrion (inferred from electronic annotation from UniProtKB-KW).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from InterPro).
GO:0004368; Molecular function: glycerol-3-phosphate dehydrogenase activity (inferred from electronic annotation from InterPro).
GO:0006072; Biological process: glycerol-3-phosphate metabolic process (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR011992; EF-Hand_type.
IPR002048; EF_hand_Ca_bd.
IPR000447; FAD-dep_Gly3P_DHase.
IPR006076; FAD-dep_OxRdtase.
Graphical view of domain structure.
Gene3D G3DSA:1.10.238.10; EF-Hand_type; 1.
Pfam PF01266; DAO; 1.
PF00036; efhand; 2.
Pfam graphical view of domain structure.
PRINTS PR01001; FADG3PDH.
ProDom PD000012; EF-hand; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00054; EFh; 2.
SMART graphical view of domain structure.
PROSITE PS00018; EF_HAND_1; 1.
PS50222; EF_HAND_2; 2.
PS00977; FAD_G3PDH_1; 1.
PS00978; FAD_G3PDH_2; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P35571.
Genome annotation databases
Ensembl ENSRNOG00000033824; Rattus norvegicus. [Contig view]
GeneID 25062; -.
KEGG rno:25062; -.
Phylogenomic databases
HOVERGEN P35571; -.
Other
NextBio 605290; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Direct protein sequencing; FAD; Flavoprotein; Mitochondrion; Oxidoreductase; Phosphoprotein; Repeat; Transit peptide.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
TRANSIT   1    42  42     Mitochondrion. 
CHAIN   43   727  685     Glycerol-3-phosphate dehydrogenase, mitochondrial. PRO_0000010431
DOMAIN   623   658  36     EF-hand 1. 
DOMAIN   659   694  36     EF-hand 2. 
NP_BIND   71    99  29     FAD (Potential). 
CA_BIND   672   683  12     Potential. 
MOD_RES   600   600        Phosphotyrosine (By similarity). 
MOD_RES   601   601        Phosphotyrosine (By similarity). 
Sequence information
Length: 727 AA [This is the length of the unprocessed precursor] Molecular weight: 80973 Da [This is the MW of the unprocessed precursor] CRC64: B2AAA45E93F5F7CB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAFQKVVKGT ILMGGGALAT VLGLSQFAHY RRKQVSLAYV EAATCFSEPV NREPPSREAQ 

        70         80         90        100        110        120 
LMTLQNTSEF DILVIGGGAT GCGCALDAVT RGLKTALVER NDFASGTSSR STKLIHGGVR 

       130        140        150        160        170        180 
YLQKAITNLD VEQYRMVKEA LHERANLLEI APHLSAPLPI MLPLYKWWQL PYYWVGIKMY 

       190        200        210        220        230        240 
DLVAGSHCLK SSYVLSKSRA LEHFPMLQKD KLVGAIVYYD GQHNDARMNL AIALTAARYG 

       250        260        270        280        290        300 
AATANYMEVV SLLKKTDPET GKERVSGARC KDVLTGHEFN VRAKCVINAT GPFTDSVRKM 

       310        320        330        340        350        360 
DDNDVVPICQ PSAGVHIVMP GYYSPENMGL LDPATSDGRV IFFLPWEKMT IAGTTDSPTD 

       370        380        390        400        410        420 
VTHHPIPSED DINFILNEVR NYLSCDVEVR RGDVLAAWSG IRPLVTDPKS ANTQSISRNH 

       430        440        450        460        470        480 
VVEVSDSGLI TIAGGKWTTY RSMAEDTVNK AVKLHNLNAG PSRTVGLFLQ GGKDWSPTLY 

       490        500        510        520        530        540 
IRLVQDYGLE SEVAQHLAKT YGDKAFDVAK MASVTGKRWP VVGVRLVSEF PYIEAEVKYG 

       550        560        570        580        590        600 
IKEYACTAVD MISRRTRLAF LNVQAAEEAL PKIVELMGRE LNWSELRKQE ELETATRFLY 

       610        620        630        640        650        660 
YEMGYKSRTE QLTDSTEISL LPPDIDRYKK RFHMFDEDEK GFITIVDVQR VLESINVQMD 

       670        680        690        700        710        720 
EDTLHEILCE VDLNKNGQVE LHEFLQLMSA VHTGRVSGSR LAILMKTAEE NLDRRVPIPV 


DRSCGGL 

P35571 in FASTA format

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