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UniProtKB/Swiss-Prot entry P38416

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LOXB_SOLLC
Primary accession number P38416
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1994
Sequence was last modified on October 1, 1994 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 62)
Name and origin of the protein
Protein name Lipoxygenase B
Synonym EC 1.13.11.12
Gene name
Name: LOX1.2
Synonyms: LOXB
From
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Caruso;
TISSUE=Pericarp;
DOI=10.1104/pp.106.1.109; PubMed=7972514 [NCBI, ExPASy, EBI, Israel, Japan]
Ferrie B.J., Beaudoin N., Burkhart W., Bowsher C.G., Rothstein S.J.;
"The cloning of two tomato lipoxygenase genes and their differential expression during fruit ripening.";
Plant Physiol. 106:109-118(1994).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U09025; AAA53183.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T06339; T06339.
3D structure databases
HSSP P09186; 1NO3. [HSSP ENTRY / PDB]
ModBase P38416.
Family and domain databases
InterPro IPR000907; LipOase.
IPR013819; LipOase_C.
IPR001024; LipOase_LH2.
IPR001246; LipOase_pln.
Graphical view of domain structure.
Gene3D G3DSA:2.60.60.20; Lipase_LipOase; 1.
PANTHER PTHR11771; LipOase; 1.
Pfam PF00305; Lipoxygenase; 1.
PF01477; PLAT; 1.
Pfam graphical view of domain structure.
PRINTS PR00087; LIPOXYGENASE.
PR00468; PLTLPOXGNASE.
SMART SM00308; LH2; 1.
SMART graphical view of domain structure.
PROSITE PS00711; LIPOXYGENASE_1; 1.
PS00081; LIPOXYGENASE_2; 1.
PS51393; LIPOXYGENASE_3; 1.
PS50095; PLAT; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P38416.
Other
ProtoNet P38416.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Dioxygenase; Fatty acid biosynthesis; Iron; Lipid synthesis; Metal-binding; Oxidoreductase; Oxylipin biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   859  859     Lipoxygenase B. PRO_0000220706
DOMAIN   34   158  125     PLAT. 
DOMAIN   161   859  699     Lipoxygenase. 
METAL   521   521        Iron; catalytic (By similarity). 
METAL   526   526        Iron; catalytic (By similarity). 
METAL   711   711        Iron; catalytic (By similarity). 
METAL   859   859        Iron; via carboxylate; catalytic (By similarity). 
Sequence information
Length: 859 AA [This is the length of the unprocessed precursor] Molecular weight: 97122 Da [This is the MW of the unprocessed precursor] CRC64: DAD79B10AE627434 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSLGGIVDAI LGKDDRPKVK GRVILMKKNV LDFINIGASV VDGISDLLGQ KVSIQLISGS 

        70         80         90        100        110        120 
VNYDGLEGKL SNPAYLESWL TDITPITAGE STFSVTFDWD RDEFGVPGAF IIKNLHLNEF 

       130        140        150        160        170        180 
FLKSLTLEDV PNYGKIHFVC NSWVYPAFRY KSDRIFFANQ AYLPSETPQP LRKYRENELV 

       190        200        210        220        230        240 
ALRGDGTGKL EEWDRVYDYA CYNDLGEPDK GEEYARPILG GSSEYPYPRR GRTGREPTKA 

       250        260        270        280        290        300 
DPNCESRNPL PMSLDIYVPR DERFGHVKKS DFLTSSLKSS LQTLLPAFKA LCDNTPNEFN 

       310        320        330        340        350        360 
SFADVLNLYE GGIKLPEGPW LKAITDNISS EILKDILQTD GQGLLKYPTP QVIQGDKTAW 

       370        380        390        400        410        420 
RTDEEFGREM LAGSNPVLIS RLQEFPPKSK LDPTIYGNQN STITTEHVQD KLNGLTVNEA 

       430        440        450        460        470        480 
IKSNRLFILN HHDIVMPLLR KINMSANTKA YASRTLLFLQ DDRTLKPLAI ELSLPHPDGD 

       490        500        510        520        530        540 
QFGTVSKVYT PADQGVEGSI WQFAKAYVAV NDMGIHQLIS HWLNTHAVIE PFVVATNRHL 

       550        560        570        580        590        600 
SVLHPIHKLL HPHFRNTMNI NALARETLTY DGGFETSLFP AKYSMEMSAA AYKDWVFPEQ 

       610        620        630        640        650        660 
ALPADLLKRG VAVEDLSSPH GIRLLILDYP YAVDGLEIWA AIKSWVTEYC KFYYKSDETV 

       670        680        690        700        710        720 
EKDTELQAWW KELREEGHGD KKDEAWWPKL QTRQELRDCC TIIIWIASAL HAALHFGLYS 

       730        740        750        760        770        780 
YAGYLPNRPT LSCNLMPEPG SVEYEELKTN PDKVFLKTFV PQLQSLLEIS IFEVSSRHAS 

       790        800        810        820        830        840 
DEVYLGQRDS IEWTKDKEPL VAFERFGKML SDIENRIMIM NSHKSWKNRS GPVNVPYTLL 

       850 
FPTSEEGLTG KGIPNSVSI
P38416 in FASTA format

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