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UniProtKB/Swiss-Prot entry P39755


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NDHF_BACSU
Primary accession number P39755
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1995
Sequence was last modified on November 1, 1995 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 58)
Name and origin of the protein
Protein name Probable NADH-quinone oxidoreductase subunit 5
Synonyms EC 1.6.99.5
NADH dehydrogenase subunit 5
Gene name
Name: ndhF
Synonyms: ybxE
OrderedLocusNames: BSU01830
From
Bacillus subtilis [TaxID: 1423] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=168;
PubMed=7565865 [NCBI, ExPASy, EBI, Israel, Japan]
Morohoshi F., Munakata N.;
"Diverse capacities for the adaptive response to DNA alkylation in Bacillus species and strains.";
Mutat. Res. 337:97-110(1995).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=168;
Haga K., Liu H., Yasumoto K., Takahashi H., Yoshikawa H.;
"Sequence analysis of the 70kb region between 17 and 23 degree of the Bacillus subtilis chromosome.";
Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=168;
DOI=10.1038/36786; PubMed=9384377 [NCBI, ExPASy, EBI, Israel, Japan]
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.;
"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.";
Nature 390:249-256(1997).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-91.
STRAIN=168;
Morohoshi F., Munakata N.;
Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U28323; AAA70186.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB006424; BAA33076.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z99104; CAB11959.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D21197; BAA21007.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C69666; C69666.
RefSeq NP_388064.1; -.
3D structure databases
ModBase P39755.
Enzyme and pathway databases
BioCyc BSUB224308:BSU0183-MON; -.
Organism-specific databases
SubtiList BG10949; ndhF. [Micado]
Family and domain databases
InterPro IPR003916; NADHub_OxRdtase_5.
IPR001750; Oxidored_q1.
Graphical view of domain structure.
Pfam PF00361; Oxidored_q1; 1.
Pfam graphical view of domain structure.
PRINTS PR01434; NADHDHGNASE5.
BLOCKS P39755.
Genome annotation databases
GeneID 938593; -.
GenomeReviews AL009126_GR; BSU01830.
KEGG bsu:BSU01830; -.
NMPDR fig|224308.1.peg.183; -.
Phylogenomic databases
HOGENOM P39755; -.
Genome annotation databases
CMR P39755; BSU01830.
Other
ProtoNet P39755.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Complete proteome; Membrane; NAD; Oxidoreductase; Quinone; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   505  505     Probable NADH-quinone oxidoreductase subunit 5. PRO_0000118225
TRANSMEM   9    29  21     Potential. 
TRANSMEM   37    57  21     Potential. 
TRANSMEM   68    88  21     Potential. 
TRANSMEM   123   143  21     Potential. 
TRANSMEM   162   182  21     Potential. 
TRANSMEM   204   224  21     Potential. 
TRANSMEM   232   252  21     Potential. 
TRANSMEM   259   279  21     Potential. 
TRANSMEM   303   323  21     Potential. 
TRANSMEM   355   375  21     Potential. 
TRANSMEM   410   430  21     Potential. 
TRANSMEM   446   466  21     Potential. 
Sequence information
Length: 505 AA [This is the length of the unprocessed precursor] Molecular weight: 55468 Da [This is the MW of the unprocessed precursor] CRC64: B62D1EE3B6004358 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLVSLSLSSL LTLFFIMLMA SGISGLLFLH PRVPLSFVRI HIGILALPLL VSLLILANSG 

        70         80         90        100        110        120 
VSGNVGPWHL DSLACLMTFF VLAIGFIIQR FSVRYLMGDR SYRKYFTLFT FTTGAASMTW 

       130        140        150        160        170        180 
LSGDLRLMVL FWGATLVGLT LLIRLNSAWQ VASEAAKISG RLFLLSWFSL FFAMMWLFHA 

       190        200        210        220        230        240 
TGQWQLSLVV TNESLAGLGE WERTGIQLLI VLAVIIPAAQ WPFQRWLVES IVAPTPVSAI 

       250        260        270        280        290        300 
MHAGLVNAGG IILTRFSPLF HGGIASIILL LLASISVLIG TGISLVQVDY KRQLVGSTIG 

       310        320        330        340        350        360 
QMGFMLIQCA LGAYIAAIIH LILHGLFKAT LFLQAGSAVG RHEVSTRTNE RTSYLWVMAG 

       370        380        390        400        410        420 
RILSLVIGVA FWLTAPGDGY HLISALILGW SLSVSWDQLV AFGEGRIGRI AGLTVLGGAA 

       430        440        450        460        470        480 
LVYFIIHHLF YKWLHTTIFQ SVQPPMSAVM IVVCLLLFGS ALGTWVARHR SSVFFAVLYL 

       490        500 
WLVRLGEAKP KSVESHPDYL KQYIS 

P39755 in FASTA format

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View entry in raw text format (no links)
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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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