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UniProtKB/Swiss-Prot entry P40875


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SOXB_CORS1
Primary accession number P40875
Secondary accession number Q46335
Integrated into Swiss-Prot on February 1, 1995
Sequence was last modified on November 1, 1997 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 62)
Name and origin of the protein
Protein name Sarcosine oxidase subunit beta
Synonyms Sarcosine oxidase subunit B
EC 1.5.3.1
Gene name
Name: soxB
From
Corynebacterium sp. (strain P-1) [TaxID: 69006] 
Taxonomy Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1074/jbc.270.31.18252; PubMed=7543100 [NCBI, ExPASy, EBI, Israel, Japan]
Chlumsky L.J., Zhang L., Jorns M.S.;
"Sequence analysis of sarcosine oxidase and nearby genes reveals homologies with key enzymes of folate one-carbon metabolism.";
J. Biol. Chem. 270:18252-18259(1995).
[2]
PROTEIN SEQUENCE OF 161-187 AND 334-404.
STRAIN=U-96;
PubMed=1939012 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki H., Kawamura-Konishi Y.;
"Cysteine residues in the active site of Corynebacterium sarcosine oxidase.";
J. Biochem. 109:909-917(1991).
[3]
PARTIAL PROTEIN SEQUENCE.
STRAIN=U-96;
PubMed=3202887 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki H., Kawamura-Konishi Y.;
"Presence of AMP binding sequence in subunit B of Corynebacterium sarcosine oxidase.";
Biochem. Int. 17:577-583(1988).
[4]
CHARACTERIZATION.
DOI=10.1021/bi00092a024; PubMed=7692961 [NCBI, ExPASy, EBI, Israel, Japan]
Chlumsky L.J., Zhang L., Ramsey A.J., Jorns M.S.;
"Preparation and properties of recombinant corynebacterial sarcosine oxidase: evidence for posttranslational modification during turnover with sarcosine.";
Biochemistry 32:11132-11142(1993).
[5]
FMN-BINDING.
DOI=10.1021/bi952995h; PubMed=8611516 [NCBI, ExPASy, EBI, Israel, Japan]
Willie A., Edmondson D.E., Jorns M.S.;
"Sarcosine oxidase contains a novel covalently bound FMN.";
Biochemistry 35:5292-5299(1996).
[6]
PROTEIN SEQUENCE OF 174-178, FMN-BINDING AT HIS-173, AND MASS SPECTROMETRY.
DOI=10.1021/bi972705s; PubMed=9485355 [NCBI, ExPASy, EBI, Israel, Japan]
Chlumsky L.J., Sturgess A.W., Nieves E., Jorns M.S.;
"Identification of the covalent flavin attachment site in sarcosine oxidase.";
Biochemistry 37:2089-2095(1998).
[7]
PROTEIN SEQUENCE OF 174-178, FMN-BINDING AT HIS-173, AND MASS SPECTROMETRY.
DOI=10.1023/A:1014135216860; PubMed=11902668 [NCBI, ExPASy, EBI, Israel, Japan]
Mukouyama E.B., Ohsawa H., Suzuki H.;
"Cofactors in sarcosine oxidase from Corynebacterium sp. U-96.";
J. Protein Chem. 21:59-64(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U23955; AAC43459.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR PX0049; PX0049.
3D structure databases
SMR P40875; 3-405.
ModBase P40875.
Family and domain databases
InterPro IPR006076; FAD-dep_OxRdtase.
IPR006278; SoxB.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01373; soxB; 1.
BLOCKS P40875.
Other
ProtoNet P40875.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Direct protein sequencing; FAD; Flavoprotein; FMN; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   405  405     Sarcosine oxidase subunit beta. PRO_0000072044
MOD_RES   173   173        Tele-8alpha-FMN histidine. 
VARIANT   167   167  1     R -> Y (in strain: U-96). 
VARIANT   172   173  2     KH -> CK (in strain: U-96). 
VARIANT   178   178  1     W -> T (in strain: U-96). 
VARIANT   182   182  1     R -> N (in strain: U-96). 
VARIANT   359   359  1     K -> FC (in strain: U-96). 
VARIANT   366   366  1     F -> Y (in strain: U-96). 
VARIANT   370   370  1     H -> E (in strain: U-96). 
VARIANT   374   374  1     N -> A (in strain: U-96). 
VARIANT   377   379  3     AHA -> PKK (in strain: U-96). 
VARIANT   385   385  1     S -> A (in strain: U-96). 
Sequence information
Length: 405 AA [This is the length of the unprocessed precursor] Molecular weight: 43987 Da [This is the MW of the unprocessed precursor] CRC64: 401141810BA60CDE [This is a checksum on the sequence]
        10         20         30         40         50         60 
MADLLPEHPE FLWANPEPKK SYDVVIVGGG GHGLATAYYL AKNHGITNVA VLEKGWLAGG 

        70         80         90        100        110        120 
NMARNTTIIR SNYLWDESAG IYEKSLKLWE QLPEELDYDF LFSQRGVLNL AHTLGDVRES 

       130        140        150        160        170        180 
VRRVEANKFN GVDAEWLTPE QVKEVCPIIN IGDDIRYPVM GATYQPRAGI AKHDHVAWAF 

       190        200        210        220        230        240 
ARKANEMGVD IIQNCEVTGF LKDGEKVTGV KTTRGTIHAG KVALAGAGHS SVLAELAGFE 

       250        260        270        280        290        300 
LPIQSHPLQA LVSELFEPVH PTVVMSNHIH VYVSQAHKGE LVMGAGIDSY NGYGQRGAFH 

       310        320        330        340        350        360 
VIEEQMAAAV ELFPIFARAH VLRTWGGIVD TTMDASPIIS KTPIQNLYVN CGWGTGGFKG 

       370        380        390        400 
TPGAGFTLAH TIANDEAHAL NAPFSLERFE TGHLIDEHGA AAVAH 

P40875 in FASTA format

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