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UniProtKB/Swiss-Prot entry P48932


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_CHOCR
Primary accession number P48932
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1996
Sequence was last modified on February 1, 1996 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 63)
Name and origin of the protein
Protein name Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
Synonyms EC 1.3.5.1
Iron-sulfur subunit of complex II
Ip
Gene name
Name: SDH2
Synonyms: SDHB
From
Chondrus crispus (Carragheen) [TaxID: 2769] 
Encoded on Mitochondrion.
Taxonomy Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1007/s002940050036; PubMed=8821668 [NCBI, ExPASy, EBI, Israel, Japan]
Viehmann S., Richard O., Boyen C., Zetsche K.;
"Genes for two subunits of succinate dehydrogenase form a cluster on the mitochondrial genome of Rhodophyta.";
Curr. Genet. 29:199-201(1996).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
TISSUE=Apices;
DOI=10.1006/jmbi.1995.0392; PubMed=7616569 [NCBI, ExPASy, EBI, Israel, Japan]
Leblanc C., Boyen C., Richard O., Bonnard G., Grienenberger J.-M., Kloareg B.;
"Complete sequence of the mitochondrial DNA of the rhodophyte Chondrus crispus (Gigartinales). Gene content and genome organization.";
J. Mol. Biol. 250:484-495(1995).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z47547; CAA87611.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S59114; S59114.
RefSeq NP_062488.1; -.
3D structure databases
HSSP P07014; 1NEK. [HSSP ENTRY / PDB]
ModBase P48932.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; 1.
PS51085; 2FE2S_FER_2; 1.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P48932.
Genome annotation databases
GeneID 809396; -.
Other
ProtoNet P48932.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   250  250     Succinate dehydrogenase [ubiquinone] iron-sulfur subunit. PRO_0000158694
DOMAIN   30   110  81     2Fe-2S ferredoxin-type. 
DOMAIN   153   183  31     4Fe-4S ferredoxin-type. 
METAL   73    73        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   78    78        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   81    81        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   93    93        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   163   163        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   166   166        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   169   169        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   173   173        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   220   220        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   226   226        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   230   230        Iron-sulfur 2 (4Fe-4S) (By similarity). 
BINDING   178   178        Ubiquinone; shared with DHSD (By similarity). 
Sequence information
Length: 250 AA [This is the length of the unprocessed precursor] Molecular weight: 28887 Da [This is the MW of the unprocessed precursor] CRC64: 09511AE52A4CA149 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIIKNLNQKI ITIDNSSPYQ KFIRIYRWNP NLNLNPWFSI FPISTNNCGP MILDALIQIK 

        70         80         90        100        110        120 
NIQDSSLTFR RSCREGICGS CSMNIDGTNS LACLRSLNTK SNFITIYPLP HTYIIKDLVP 

       130        140        150        160        170        180 
DLSNFYAQYK LIKPWLINKI GFSLKENLQS KIDRLELDGL YECILCACCS ASCPSYWWNQ 

       190        200        210        220        230        240 
DKYLGPAILL QAYRWIVDSR DNSTENRLNF LNNKMRLFRC HTIMNCSKTC PKSLNPGKAI 

       250 
ASIKYRIINN 

P48932 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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NPSA logo NPSA Sequence analysis tools

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