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UniProtKB/Swiss-Prot entry P58739


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA_AGRT5
Primary accession number P58739
Secondary accession numbers None
Integrated into Swiss-Prot on March 5, 2002
Sequence was last modified on March 5, 2002 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 43)
Name and origin of the protein
Protein name D-amino acid dehydrogenase small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA
OrderedLocusNames: Atu3293
ORFNames: AGR_L_3050
From
Agrobacterium tumefaciens (strain C58 / ATCC 33970) [TaxID: 176299] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066804; PubMed=11743193 [NCBI, ExPASy, EBI, Israel, Japan]
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066803; PubMed=11743194 [NCBI, ExPASy, EBI, Israel, Japan]
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE007870; AAK90097.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AG2961; AG2961.
G98321; G98321.
RefSeq NP_357312.1; -.
3D structure databases
ModBase P58739.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS P58739.
Genome annotation databases
GeneID 1135167; -.
GenomeReviews AE007870_GR; Atu3293.
KEGG atc:AGR_L_3050; -.
atu:Atu3293; -.
Phylogenomic databases
HOGENOM P58739; -.
Other
LinkHub P58739; -.
Genome annotation databases
CMR P58739; Atu3293.
Other
ProtoNet P58739.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   418  418     D-amino acid dehydrogenase small subunit. PRO_0000166124
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 418 AA [This is the length of the unprocessed precursor] Molecular weight: 45179 Da [This is the MW of the unprocessed precursor] CRC64: 6DD2ACAF503BC216 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNVTILGAGV VGVTSAWYLA KAGHKVTVID RQPAAALETS FANAGEVSPG YSSPWAAPGI 

        70         80         90        100        110        120 
PMKAMKWLFM KHAPLIIRPT ADPAAWRWMS QMLRNCTSAR YAINKSRMVR VAEYSRDCLM 

       130        140        150        160        170        180 
ALREETGIDY DQRMQGTLEV FRTQKQFDAI GKDVDVLTAG GVPFEILDRD GCAAIEPGLA 

       190        200        210        220        230        240 
PAKEKIVGGL RLPGDETGDC FMFTTELARM AEEAGVTFLY DTGIMRPIVE GGRIKAVETT 

       250        260        270        280        290        300 
RGLIEADIFV AALGSYSPQF VRQLGLTLPV YPVKGYSITV PIVKEERAPV STVMDETFKV 

       310        320        330        340        350        360 
AITRLGSRIR AGGMAEIAGF SKDLPAARQE TLAHSVEDLF GGAGDQSQAK FWCGLRPMTP 

       370        380        390        400        410 
DGTPVIGATR YSNLYLNTGH GTLGWTMSCG SARVLADLIS GNKPEIDTHD LAISRYAA 

P58739 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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NPSA logo NPSA Sequence analysis tools

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