ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P59723


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name HIF1N_DANRE
Primary accession number P59723
Secondary accession numbers None
Integrated into Swiss-Prot on June 16, 2003
Sequence was last modified on June 16, 2003 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 36)
Name and origin of the protein
Protein name Hypoxia-inducible factor 1-alpha inhibitor
Synonyms EC 1.14.11.16
Hypoxia-inducible factor asparagine hydroxylase
Gene name
Name: hif1an
From
Danio rerio (Zebrafish) (Brachydanio rerio) [TaxID: 7955] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=AB;
NIH - Zebrafish Gene Collection (ZGC) project;
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BC044475; AAH44475.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_958904.1; -.
UniGene Dr.13371
3D structure databases
HSSP Q9NWT6; 1MZE. [HSSP ENTRY / PDB]
SMR P59723; 16-340.
ModBase P59723.
Organism-specific databases
ZFIN ZDB-GENE-030826-19; hif1an.
Gene expression databases
ArrayExpress P59723; -.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from UniProtKB-KW).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0016702; Molecular function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (inferred from electronic annotation from UniProtKB-KW).
GO:0004597; Molecular function: peptide-aspartate beta-dioxygenase activity (inferred from electronic annotation from EC).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006355; Biological process: regulation of transcription, DNA-dependent (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR003347; TF_JmjC_AAH.
Graphical view of domain structure.
SMART SM00558; JmjC; 1.
SMART graphical view of domain structure.
PROSITE PS51184; JMJC; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P59723.
Genome annotation databases
Ensembl ENSDARG00000031915; Danio rerio. [Contig view]
GeneID 373126; -.
KEGG dre:373126; -.
Phylogenomic databases
HOGENOM P59723; -.
HOVERGEN P59723; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Dioxygenase; Iron; Metal-binding; Nucleus; Oxidoreductase; Transcription; Transcription regulation.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   344  344     Hypoxia-inducible factor 1-alpha inhibitor. PRO_0000083973
DOMAIN   133   303  171     JmjC. 
METAL   190   190        Iron; catalytic (By similarity). 
METAL   192   192        Iron; catalytic (By similarity). 
METAL   270   270        Iron; catalytic (By similarity). 
BINDING   136   136        2-oxoglutarate (By similarity). 
BINDING   187   187        2-oxoglutarate (By similarity). 
BINDING   205   205        2-oxoglutarate (By similarity). 
Sequence information
Length: 344 AA [This is the length of the unprocessed precursor] Molecular weight: 39876 Da [This is the MW of the unprocessed precursor] CRC64: FA9E2DC8B173B64C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAETDGAAAF TELRDPGWDG SQLRQYTFPT RQIPRLSHTD PRAEVLINNE EPVVLTDTSL 

        70         80         90        100        110        120 
VYPALKWDIP YLQENIGNGD FSVYIAENHK FLYYDEKKMV NFQDFVPKSR RIEMKFSEFV 

       130        140        150        160        170        180 
DKMHQTEEQG GKGRVYLQQT LNDTVGRKIV VDFLGFNWNW INKQQAKRNW GPLTSNLLLI 

       190        200        210        220        230        240 
GMEGNVTPAH YDEQQNFFAQ IKGHKRCILF PPEQFDCLYP YPVHHPCDRQ SQVDFENPDY 

       250        260        270        280        290        300 
DKFPNFKNAV GYEAVVGPGD VLYIPMYWWH HIESLLNGGE TITVNFWYKG APTPKRIEYP 

       310        320        330        340 
LKAHQKVAIM RNIEKMLGEA LGDPHEVGPL LNMMIKGRYD HGLS 

P59723 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!