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UniProtKB/Swiss-Prot entry P62168


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NCS1_RAT
Primary accession number P62168
Secondary accession numbers P36610 Q9UK26
Integrated into Swiss-Prot on June 21, 2004
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 47)
Name and origin of the protein
Protein name Neuronal calcium sensor 1
Synonyms NCS-1
Frequenin homolog
Frequenin-like protein
Frequenin-like ubiquitous protein
Gene name
Name: Freq
Synonyms: Flup, Ncs1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1006/bbrc.1995.2601; PubMed=7488079 [NCBI, ExPASy, EBI, Israel, Japan]
de Castro E., Nef S., Fiumelli H., Lenz S.E., Kawamura S., Nef P.;
"Regulation of rhodopsin phosphorylation by a family of neuronal calcium sensors.";
Biochem. Biophys. Res. Commun. 216:133-140(1995).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
Lindemeier J.;
Submitted (OCT-1994) to the EMBL/GenBank/DDBJ databases.
[3]
MYRISTOYLATION AT GLY-2, CALCIUM-BINDING, AND SUBCELLULAR LOCATION.
DOI=10.1074/jbc.274.42.30258; PubMed=10514519 [NCBI, ExPASy, EBI, Israel, Japan]
McFerran B.W., Weiss J.L., Burgoyne R.D.;
"Neuronal Ca(2+) sensor 1. Characterization of the myristoylated protein, its cellular effects in permeabilized adrenal chromaffin cells, Ca(2+)-independent membrane association, and interaction with binding proteins, suggesting a role in rapid Ca(2+) signal transduction.";
J. Biol. Chem. 274:30258-30265(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L27421; AAA88510.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X82188; CAA57678.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_077342.1; -.
UniGene Rn.62653
3D structure databases
SMR P62168; 3-188.
ModBase P62168.
Protein-protein interaction databases
IntAct P62168; -.
Organism-specific databases
RGD 68417; Freq.
Gene expression databases
ArrayExpress P62168; -.
GermOnline ENSRNOG00000008761; Rattus norvegicus.
Ontologies
GO
GO:0005794; Cellular component: Golgi apparatus (inferred from electronic annotation from UniProtKB-KW).
GO:0016020; Cellular component: membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from InterPro).
GO:0008427; Molecular function: calcium-dependent protein kinase inhibitor activity (traceable author statement from UniProtKB).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR011992; EF-Hand_type.
IPR002048; EF_hand_Ca_bd.
IPR001125; Recoverin.
Graphical view of domain structure.
Gene3D G3DSA:1.10.238.10; EF-Hand_type; 1.
Pfam PF00036; efhand; 3.
Pfam graphical view of domain structure.
PRINTS PR00450; RECOVERIN.
ProDom PD000012; EF-hand; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00054; EFh; 3.
SMART graphical view of domain structure.
PROSITE PS00018; EF_HAND_1; 3.
PS50222; EF_HAND_2; 3.
PROSITE graphical view of domain structure (profiles).
ProtoNet P62168.
Genome annotation databases
Ensembl ENSRNOG00000008761; Rattus norvegicus. [Contig view]
GeneID 65153; -.
KEGG rno:65153; -.
Phylogenomic databases
HOVERGEN P62168; -.
Other
NextBio 613993; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Golgi apparatus; Lipoprotein; Membrane; Myristate; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   190  189     Neuronal calcium sensor 1. PRO_0000073790
DOMAIN   24    59  36     EF-hand 1. 
DOMAIN   60    95  36     EF-hand 2. 
DOMAIN   96   131  36     EF-hand 3. 
DOMAIN   144   179  36     EF-hand 4. 
CA_BIND   73    84  12     1. 
CA_BIND   109   120  12     2. 
CA_BIND   157   168  12     3. 
REGION   36    47  12     Ancestral calcium site 1. 
LIPID   2     2        N-myristoyl glycine. 
Sequence information
Length: 190 AA [This is the length of the unprocessed precursor] Molecular weight: 21879 Da [This is the MW of the unprocessed precursor] CRC64: 9AF8E26A23F80D4F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGKSNSKLKP EVVEELTRKT YFTEKEVQQW YKGFIKDCPS GQLDAAGFQK IYKQFFPFGD 

        70         80         90        100        110        120 
PTKFATFVFN VFDENKDGRI EFSEFIQALS VTSRGTLDEK LRWAFKLYDL DNDGYITRNE 

       130        140        150        160        170        180 
MLDIVDAIYQ MVGNTVELPE EENTPEKRVD RIFAMMDKNA DGKLTLQEFQ EGSKADPSIV 

       190 
QALSLYDGLV 

P62168 in FASTA format

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