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UniProtKB/Swiss-Prot entry P67794


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name COX1_CHOPI
Primary accession number P67794
Secondary accession number P50670
Integrated into Swiss-Prot on October 11, 2004
Sequence was last modified on October 3, 2006 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 25)
Name and origin of the protein
Protein name Cytochrome c oxidase subunit 1
Synonyms EC 1.9.3.1
Cytochrome c oxidase polypeptide I
Gene name
Name: COI
From
Choristoneura pinus (Jack pine budworm) [TaxID: 27542] 
Encoded on Mitochondrion.
Taxonomy Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Tortricinae; Choristoneura.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Roe A., Sperling F.A.H.;
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 240-513.
STRAIN=Isolate 15;
PubMed=8078404 [NCBI, ExPASy, EBI, Israel, Japan]
Sperling F.A.H., Hickey D.A.;
"Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera).";
Mol. Biol. Evol. 11:656-665(1994).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L19095; AAA53644.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
SMR P67794; 2-506.
ModBase P67794.
Ontologies
GO
GO:0005746; Cellular component: mitochondrial respiratory chain (inferred from electronic annotation from UniProtKB-KW).
GO:0005507; Molecular function: copper ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004129; Molecular function: cytochrome-c oxidase activity (inferred from electronic annotation from EC).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000883; COX1.
Graphical view of domain structure.
Gene3D G3DSA:1.20.210.10; COX1; 1.
PANTHER PTHR10422; COX1; 1.
Pfam PF00115; COX1; 1.
Pfam graphical view of domain structure.
PRINTS PR01165; CYCOXIDASEI.
PROSITE PS50855; COX1; 1.
PS00077; COX1_CUB; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P67794.
ProtoNet P67794.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Copper; Electron transport; Heme; Iron; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Respiratory chain; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   513  513     Cytochrome c oxidase subunit 1. PRO_0000183311
TRANSMEM   16    36  21     Potential. 
TRANSMEM   62    82  21     Potential. 
TRANSMEM   101   121  21     Potential. 
TRANSMEM   144   164  21     Potential. 
TRANSMEM   182   202  21     Potential. 
TRANSMEM   233   253  21     Potential. 
TRANSMEM   267   287  21     Potential. 
TRANSMEM   304   324  21     Potential. 
TRANSMEM   337   357  21     Potential. 
TRANSMEM   384   404  21     Potential. 
TRANSMEM   413   433  21     Potential. 
TRANSMEM   451   471  21     Potential. 
METAL   60    60        Iron (heme A axial ligand) (Probable). 
METAL   239   239        Copper B (Probable). 
METAL   243   243        Copper B (Probable). 
METAL   289   289        Copper B (Probable). 
METAL   290   290        Copper B (Probable). 
METAL   375   375        Iron (heme A3 axial ligand) (Probable). 
METAL   377   377        Iron (heme A axial ligand) (Probable). 
Sequence information
Length: 513 AA [This is the length of the unprocessed precursor] Molecular weight: 57047 Da [This is the MW of the unprocessed precursor] CRC64: EE6CE68666FE3878 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MMRKWLYSTN HKDIGTLYFM FGIWAGMVGT SLSLLIRAEL GNPGSLIGDD QIYNTIVTAH 

        70         80         90        100        110        120 
AFIMIFFMVM PIMIGGFGNW LVPLMLGAPD MAFPRMNNMS FWLLPPSIML LISSSIVENG 

       130        140        150        160        170        180 
AGTGWTVYPP LSSNIAHSGS SVDLAIFSLH LAGISSILGA VNFITTIINM RPNNMSLDQM 

       190        200        210        220        230        240 
PLFVWSVGIT ALLLLLSLPV LAGAITMLLT DRNLNTSFFD PAGGGDPILY QHLFWFFGHP 

       250        260        270        280        290        300 
EVYILILPGF GMISHIISQE SGKKETFGCL GMIYAMMAIG LLGFVVWAHH MFTVGMDIDT 

       310        320        330        340        350        360 
RAYFTSATMI IAVPTGIKIF SWLATLHGTQ INYSPSMLWS LGFVFLFTVG GLTGVILANS 

       370        380        390        400        410        420 
SIDVTLHDTY YVVAHFHYVL SMGAVFAIMG GFVHWYPLFT GLALNPYLLK IQFFTMFIGV 

       430        440        450        460        470        480 
NLTFFPQHFL GLAGMPRRYS DYPDTYTSWN IISSLGSYIS LIATMLMLMI IWESLINKRI 

       490        500        510 
ILFPLNMNSS IEWYQNLPPA EHSYNELPIL SNF 

P67794 in FASTA format

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