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UniProtKB/Swiss-Prot entry Q04894


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ADH6_YEAST
Primary accession number Q04894
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on November 1, 1997 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 70)
Name and origin of the protein
Protein name NADP-dependent alcohol dehydrogenase 6
Synonyms EC 1.1.1.2
NADP-dependent alcohol dehydrogenase VI
ScADHVI
Gene name
Name: ADH6
OrderedLocusNames: YMR318C
ORFNames: YM9924.10C
From
Saccharomyces cerevisiae (Baker's yeast) [TaxID: 4932] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 204511 / S288c / AB972;
PubMed=9169872 [NCBI, ExPASy, EBI, Israel, Japan]
Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P., Skelton J., Walsh S.V., Whitehead S., Barrell B.G.;
"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.";
Nature 387:90-93(1997).
[2]
CRYSTALLIZATION.
DOI=10.1107/S090744490201661X; PubMed=12554944 [NCBI, ExPASy, EBI, Israel, Japan]
Valencia E., Rosell A., Larroy C., Farres J., Biosca J.A., Fita I., Pares X., Ochoa W.F.;
"Crystallization and preliminary X-ray analysis of NADP(H)-dependent alcohol dehydrogenases from Saccharomyces cerevisiae and Rana perezi.";
Acta Crystallogr. D 59:334-337(2003).
[3]
LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
DOI=10.1038/nature02046; PubMed=14562106 [NCBI, ExPASy, EBI, Israel, Japan]
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.;
"Global analysis of protein expression in yeast.";
Nature 425:737-741(2003).
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-359, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M400219-MCP200; PubMed=15665377 [NCBI, ExPASy, EBI, Israel, Japan]
Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J., Mann M., Jensen O.N.;
"Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.";
Mol. Cell. Proteomics 4:310-327(2005).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-122; SER-131; SER-210 AND SER-359, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M700468-MCP200; PubMed=18407956 [NCBI, ExPASy, EBI, Israel, Japan]
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
"A multidimensional chromatography technology for in-depth phosphoproteome analysis.";
Mol. Cell. Proteomics 7:1389-1396(2008).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z54141; CAA90836.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S59311; S59311.
RefSeq NP_014051.1; -.
3D structure databases
PDB
1PIW; X-ray; 3.00 A; A/B=1-360.[ExPASy / RCSB / EBI]
1PS0; X-ray; 3.01 A; A=1-360.[ExPASy / RCSB / EBI]
1Q1N; X-ray; 3.15 A; A=1-360.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1PIW; -.
1PS0; -.
1Q1N; -.
ModBase Q04894.
Protein-protein interaction databases
DIP DIP:6308N; -.
IntAct Q04894; -.
Organism-specific databases
CYGD YMR318c; -.
SGD S000004937; ADH6.
Yeast-GFP YMR318C.
Gene expression databases
ArrayExpress Q04894; -.
GermOnline YMR318C; Saccharomyces cerevisiae.
Ontologies
GO
GO:0005625; Cellular component: soluble fraction (inferred from direct assay from SGD).
GO:0008106; Molecular function: alcohol dehydrogenase (NADP+) activity (inferred from electronic annotation from EC).
GO:0033833; Molecular function: hydroxymethylfurfural reductase (NADH) activity (inferred from mutant phenotype from SGD).
GO:0033845; Molecular function: hydroxymethylfurfural reductase (NADPH) activity (inferred from mutant phenotype from SGD).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from InterPro).
GO:0006066; Biological process: cellular alcohol metabolic process (inferred from direct assay from SGD).
GO:0033859; Biological process: furaldehyde metabolic process (inferred from mutant phenotype from SGD).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR013154; AlcDHase_GroES-like.
IPR002085; AlcDHase_SF_Zn.
IPR013149; AlcDHase_Zn-bd.
IPR002328; AlcDHase_Zn_CS.
Graphical view of domain structure.
PANTHER PTHR11695; ADH_Sf_Zn; 1.
Pfam PF08240; ADH_N; 1.
PF00107; ADH_zinc_N; 1.
Pfam graphical view of domain structure.
PROSITE PS00059; ADH_ZINC; 1.
ProtoNet Q04894.
Proteomic databases
PeptideAtlas Q04894; -.
Genome annotation databases
Ensembl YMR318C; Saccharomyces cerevisiae. [Contig view]
GeneID 855368; -.
GenomeReviews Z71257_GR; YMR318C.
KEGG sce:YMR318C; -.
NMPDR fig|4932.3.peg.5111; -.
Phylogenomic databases
HOGENOM Q04894; -.
Other
LinkHub Q04894; -.
NextBio 979148; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Metal-binding; NADP; Oxidoreductase; Phosphoprotein; Zinc.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   360  360     NADP-dependent alcohol dehydrogenase 6. PRO_0000160734
METAL   46    46        Zinc 1; catalytic (By similarity). 
METAL   68    68        Zinc 1; catalytic (By similarity). 
METAL   100   100        Zinc 2 (By similarity). 
METAL   103   103        Zinc 2 (By similarity). 
METAL   106   106        Zinc 2 (By similarity). 
METAL   114   114        Zinc 2 (By similarity). 
METAL   163   163        Zinc 1; catalytic (By similarity). 
MOD_RES   122   122        Phosphoserine. 
MOD_RES   131   131        Phosphoserine. 
MOD_RES   210   210        Phosphoserine. 
MOD_RES   359   359        Phosphoserine. 
TURN   3     5  3      
STRAND   7    12  6      
STRAND   15    17  3      
STRAND   22    26  5      
STRAND   35    45  11      
HELIX   47    53  7      
TURN   54    57  4      
STRAND   62    64  3      
STRAND   70    77  8      
STRAND   90    93  4      
STRAND   95    98  4      
HELIX   104   107  4      
HELIX   111   113  3      
STRAND   118   122  5      
STRAND   134   142  9      
HELIX   143   145  3      
STRAND   146   148  3      
HELIX   155   158  4      
HELIX   159   162  4      
HELIX   164   174  11      
STRAND   182   186  5      
HELIX   190   202  13      
STRAND   205   213  9      
HELIX   216   221  6      
STRAND   225   229  5      
HELIX   230   232  3      
HELIX   236   239  4      
STRAND   244   249  6      
TURN   259   261  3      
HELIX   262   265  4      
STRAND   266   274  9      
STRAND   284   286  3      
HELIX   288   290  3      
STRAND   295   298  4      
HELIX   304   316  13      
STRAND   323   329  7      
HELIX   330   342  13      
STRAND   346   352  7      
HELIX   355   358  4      
Sequence information
Length: 360 AA [This is the length of the unprocessed precursor] Molecular weight: 39618 Da [This is the MW of the unprocessed precursor] CRC64: 3F785BE0C5ED8CF1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSYPEKFEGI AIQSHEDWKN PKKTKYDPKP FYDHDIDIKI EACGVCGSDI HCAAGHWGNM 

        70         80         90        100        110        120 
KMPLVVGHEI VGKVVKLGPK SNSGLKVGQR VGVGAQVFSC LECDRCKNDN EPYCTKFVTT 

       130        140        150        160        170        180 
YSQPYEDGYV SQGGYANYVR VHEHFVVPIP ENIPSHLAAP LLCGGLTVYS PLVRNGCGPG 

       190        200        210        220        230        240 
KKVGIVGLGG IGSMGTLISK AMGAETYVIS RSSRKREDAM KMGADHYIAT LEEGDWGEKY 

       250        260        270        280        290        300 
FDTFDLIVVC ASSLTDIDFN IMPKAMKVGG RIVSISIPEQ HEMLSLKPYG LKAVSISYSA 

       310        320        330        340        350        360 
LGSIKELNQL LKLVSEKDIK IWVETLPVGE AGVHEAFERM EKGDVRYRFT LVGYDKEFSD 

Q04894 in FASTA format

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