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UniProtKB/Swiss-Prot entry Q07523


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HAOX2_RAT
Primary accession number Q07523
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 68)
Name and origin of the protein
Protein name Hydroxyacid oxidase 2
Synonyms HAOX2
EC 1.1.3.15
(S)-2-hydroxy-acid oxidase, peroxisomal
Long chain alpha-hydroxy acid oxidase
Long-chain L-2-hydroxy acid oxidase
Gene name
Name: Hao2
Synonyms: Hao3, Haox2
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Wistar;
TISSUE=Kidney;
PubMed=8508789 [NCBI, ExPASy, EBI, Israel, Japan]
Belmouden A., Le K.H.D., Lederer F., Garchon H.J.;
"Molecular cloning and nucleotide sequence of cDNA encoding rat kidney long-chain L-2-hydroxy acid oxidase. Expression of the catalytically active recombinant protein as a chimaera.";
Eur. J. Biochem. 214:17-25(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
PROTEIN SEQUENCE OF 2-353.
TISSUE=Kidney;
PubMed=1939137 [NCBI, ExPASy, EBI, Israel, Japan]
Le K.H.D., Lederer F.;
"Amino acid sequence of long chain alpha-hydroxy acid oxidase from rat kidney, a member of the family of FMN-dependent alpha-hydroxy acid-oxidizing enzymes.";
J. Biol. Chem. 266:20877-20881(1991).
[4]
PROTEIN SEQUENCE OF 2-41, AND CHARACTERIZATION.
DOI=10.1021/bi00419a029; PubMed=3061453 [NCBI, ExPASy, EBI, Israel, Japan]
Urban P., Chirat I., Lederer F.;
"Rat kidney L-2-hydroxyacid oxidase. Structural and mechanistic comparison with flavocytochrome b2 from baker's yeast.";
Biochemistry 27:7365-7371(1988).
[5]
X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) IN COMPLEX WITH FMN AND SUBSTRATE ANALOG, AND SUBUNIT.
DOI=10.1021/bi048616e; PubMed=15683236 [NCBI, ExPASy, EBI, Israel, Japan]
Cunane L.M., Barton J.D., Chen Z.-W., Le K.H.D., Amar D., Lederer F., Mathews F.S.;
"Crystal structure analysis of recombinant rat kidney long chain hydroxy acid oxidase.";
Biochemistry 44:1521-1531(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X67156; CAA47629.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC078781; AAH78781.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S33322; S33322.
RefSeq NP_114471.1; -.
UniGene Rn.198611
3D structure databases
PDB
1TB3; X-ray; 2.30 A; A/B/C/D/E/F/G/H=1-353.[ExPASy / RCSB / EBI]
PDBsum 1TB3; -.
ModBase Q07523.
Organism-specific databases
RGD 70972; Hao2.
Gene expression databases
ArrayExpress Q07523; -.
GermOnline ENSRNOG00000019470; Rattus norvegicus.
Ontologies
GO
GO:0005777; Cellular component: peroxisome (inferred from direct assay from HGNC).
QuickGo view.
Family and domain databases
InterPro IPR013785; Aldolase_TIM.
IPR012133; Alpha_OHA_DHase_FMN.
IPR008259; FMN_hydac_DHase_AS.
IPR000262; FMN_OHA_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
Pfam PF01070; FMN_dh; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000138; Al-hdrx_acd_dh; 1.
PROSITE PS00557; FMN_HYDROXY_ACID_DH_1; 1.
PS51349; FMN_HYDROXY_ACID_DH_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q07523.
Genome annotation databases
Ensembl ENSRNOG00000019470; Rattus norvegicus. [Contig view]
GeneID 84029; -.
KEGG rno:84029; -.
Phylogenomic databases
HOVERGEN Q07523; -.
Other
ProtoNet Q07523.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Direct protein sequencing; Flavoprotein; FMN; Oxidoreductase; Peroxisome.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   353  352     Hydroxyacid oxidase 2. PRO_0000206322
DOMAIN   2   353  352     FMN hydroxy acid dehydrogenase. 
NP_BIND   279   303  25     FMN. 
MOTIF   351   353  3     Microbody targeting signal (Potential). 
ACT_SITE   248   248        Proton acceptor (By similarity). 
BINDING   106   106        FMN. 
BINDING   128   128        FMN. 
BINDING   130   130        Substrate. 
BINDING   156   156        FMN. 
BINDING   165   165        Substrate. 
BINDING   224   224        FMN. 
BINDING   251   251        Substrate (Potential). 
HELIX   6    15  10      
HELIX   19    26  8      
HELIX   33    44  12      
STRAND   62    64  3      
STRAND   67    75  9      
HELIX   81    83  3      
TURN   86    88  3      
HELIX   89    99  11      
STRAND   103   105  3      
HELIX   113   119  7      
STRAND   125   128  4      
HELIX   137   148  12      
STRAND   153   156  4      
HELIX   166   170  5      
HELIX   207   214  8      
STRAND   221   226  6      
HELIX   229   237  9      
STRAND   241   245  5      
HELIX   248   250  3      
HELIX   259   270  12      
STRAND   273   281  9      
HELIX   285   293  9      
STRAND   299   302  4      
HELIX   303   335  33      
HELIX   340   342  3      
HELIX   345   347  3      
Sequence information
Length: 353 AA [This is the length of the unprocessed precursor] Molecular weight: 39201 Da [This is the MW of the unprocessed precursor] CRC64: A2FDD4BF34E269E5 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPLVCLADFK AHAQKQLSKT SWDFIEGEAD DGITYSENIA AFKRIRLRPR YLRDMSKVDT 

        70         80         90        100        110        120 
RTTIQGQEIS APICISPTAF HSIAWPDGEK STARAAQEAN ICYVISSYAS YSLEDIVAAA 

       130        140        150        160        170        180 
PEGFRWFQLY MKSDWDFNKQ MVQRAEALGF KALVITIDTP VLGNRRRDKR NQLNLEANIL 

       190        200        210        220        230        240 
LKDLRALKEE KPTQSVPVSF PKASFCWNDL SLLQSITRLP IILKGILTKE DAELAMKHNV 

       250        260        270        280        290        300 
QGIVVSNHGG RQLDEVSASI DALREVVAAV KGKIEVYMDG GVRTGTDVLK ALALGARCIF 

       310        320        330        340        350 
LGRPILWGLA CKGEDGVKEV LDILTAELHR CMTLSGCQSV AEISPDLIQF SRL 

Q07523 in FASTA format

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