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UniProtKB/TrEMBL entry Q09620

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q09620_CAEEL
Primary accession number Q09620
Secondary accession numbers None
Integrated into TrEMBL on November 1, 1996
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 70)
Name and origin of the protein
Protein name Protein ZK892.7, partially confirmed by transcript evidence
Synonyms None
Gene name
Name: sdz-38
ORFNames: ZK892.7
From
Caenorhabditis elegans (Roundworm) [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z48638; CAA88569.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T28071; T28071.
RefSeq NP_496158.1; -.
UniGene Cel.13746
3D structure databases
ModBase Q09620.
Protein-protein interaction databases
DIP DIP:25039N; -.
IntAct Q09620; -.
Organism-specific databases
WormBase WBGene00014131; sdz-38.
WormPep ZK892.7; CE01729. [WormPep / WorfDB]
Gene expression databases
ArrayExpress Q09620; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0009792; Biological process: embryonic development ending in birth or egg hatching (inferred from mutant phenotype from WormBase).
QuickGo view.
Family and domain databases
InterPro IPR007087; Znf_C2H2.
IPR015880; Znf_C2H2-like.
Graphical view of domain structure.
SMART SM00355; ZnF_C2H2; 2.
SMART graphical view of domain structure.
PROSITE PS00028; ZINC_FINGER_C2H2_1; 1.
PS50157; ZINC_FINGER_C2H2_2; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ZK892.7; Caenorhabditis elegans. [Contig view]
GeneID 191448; -.
KEGG cel:ZK892.7; -.
NMPDR fig|6239.3.peg.7099; -.
Other
NextBio 949198; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome.
Features
None
Sequence information
Length: 202 AA Molecular weight: 22503 Da CRC64: 5417988F45CE91CC [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MPPYFSPKSE APICGYCQLT FSQTGSMTRH RDRLHTKNHT CLICVSNCEG APILGESIKK 

        70         80         90        100        110        120 
HLQHAHGYVD VQSCSCCHWI FENKIQLRTH LDAMKATGQP GDEVVLAKGT FAPGTLSQAA 

       130        140        150        160        170        180 
ILQSKAYSAN RQQKCQQSLK VDSGGFNDLS ETQLKFILDN YSQIVGELES PNPKISGCRK 

       190        200 
RKCGMTIQHV LRDDDFKKIE LC
Q09620 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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