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UniProtKB/Swiss-Prot entry Q0BIP9


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HEM1_BURCM
Primary accession number Q0BIP9
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on October 17, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 23)
Name and origin of the protein
Protein name Glutamyl-tRNA reductase
Synonyms GluTR
EC 1.2.1.70
Gene name
Name: hemA
OrderedLocusNames: Bamb_0415
From
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [TaxID: 339670] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.;
"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000440; ABI85974.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_772308.1; -.
3D structure databases
ModBase Q0BIP9.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0008883; Molecular function: glutamyl-tRNA reductase activity (inferred from electronic annotation from HAMAP).
GO:0050661; Molecular function: NADP binding (inferred from electronic annotation from InterPro).
GO:0004764; Molecular function: shikimate 5-dehydrogenase activity (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006779; Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00087; -; 1.
PBIL [Tree]
InterPro IPR000343; 4pyrrol_synth_GluRdtase.
IPR015896; 4pyrrol_synth_GluRdtase_C.
IPR015895; 4pyrrol_synth_GluRdtase_N.
IPR016040; NAD(P)-bd.
IPR003462; ODC_Mu_crystall.
IPR006151; Shikm_DHase/Glu-tRNA_Rdtase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
PANTHER PTHR13812; ODC_Mu_crystall; 1.
Pfam PF00745; GlutR_dimer; 1.
PF05201; GlutR_N; 1.
PF01488; Shikimate_DH; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000445; 4pyrrol_synth_GluRdtase; 1.
TIGRFAMs TIGR01035; hemA; 1.
PROSITE PS00747; GLUTR; 1.
ProtoNet Q0BIP9.
Genome annotation databases
GeneID 4311408; -.
GenomeReviews CP000440_GR; Bamb_0415.
KEGG bam:Bamb_0415; -.
NMPDR fig|339670.3.peg.5989; -.
CMR Q0BIP9; Bamb_0415.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; NADP; Oxidoreductase; Porphyrin biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   432  432     Glutamyl-tRNA reductase. PRO_1000004599
NP_BIND   194   199  6     NADP (By similarity). 
REGION   55    58  4     Substrate binding (By similarity). 
REGION   119   121  3     Substrate binding (By similarity). 
ACT_SITE   56    56        Nucleophile (By similarity). 
BINDING   114   114        Substrate (By similarity). 
BINDING   125   125        Substrate (By similarity). 
SITE   104   104  1     Important for activity (By similarity). 
Sequence information
Length: 432 AA [This is the length of the unprocessed precursor] Molecular weight: 47507 Da [This is the MW of the unprocessed precursor] CRC64: 3A73F1BB532F4F57 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MQLLTIGINH HTAPVALRER VAFPLEQIKP ALVTFKNVFL GPHAPNAPEA AILSTCNRTE 

        70         80         90        100        110        120 
LYCATDDRAA REGAIRWLSE YHRISVDELA PHVYALPQSE AVRHAFRVAS GLDSMVLGET 

       130        140        150        160        170        180 
QILGQMKDAV RTATEAGALG TYLNQLFQRT FAVAKEVRGT TEIGAQSVSM AAAAVRLAQR 

       190        200        210        220        230        240 
IFETVSDQRV LFIGAGEMIE LCATHFAAQS PRELVIANRT AERGQRLAER FNGRAMPLSD 

       250        260        270        280        290        300 
LPTRMHEFDI IVSCTASTLP IIGLGAVERA VKARRHRPIF MVDLAVPRDI EPEVGKLKDV 

       310        320        330        340        350        360 
FLYTVDDLGA IVREGNASRQ AAVAQAETII ETRVQNFMQW LDTRSVVPVI RHMHTQADAL 

       370        380        390        400        410        420 
RRAEVEKAQK LLARGDDPAA VLEALSQALT NKLIHGPTSA LNRVNGADRD SLIDLMRGFY 

       430 
QHAPRSNDQS GH 

Q0BIP9 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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