ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q0D3N0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name PER2_ORYSJ
Primary accession number Q0D3N0
Secondary accession numbers O22441 P37835 Q7F1U3
Integrated into Swiss-Prot on September 11, 2007
Sequence was last modified on October 17, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 18)
Name and origin of the protein
Protein name Peroxidase 2 [Precursor]
Synonym EC 1.11.1.7
Gene name
Name: PRX112
Synonyms: POXGX9
OrderedLocusNames: Os07g0677300, LOC_Os07g48030
ORFNames: OJ1167_G06.126, OJ1409_C08.1
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1016/j.phytochem.2004.06.023; PubMed=15279994 [NCBI, ExPASy, EBI, Israel, Japan]
Passardi F., Longet D., Penel C., Dunand C.;
"The class III peroxidase multigenic family in rice and its evolution in land plants.";
Phytochemistry 65:1879-1893(2004).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Nipponbare;
TISSUE=Root;
Hori M., Sasaki T., Minobe Y.;
"Peroxidase from rice cDNA.";
Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[4]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BN000641; CAH69354.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D16442; BAA03911.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003757; BAC79528.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003817; BAC83104.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008213; BAF22543.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T03929; T03929.
RefSeq NP_001060629.1; -.
UniGene Os.11556
3D structure databases
HSSP P22195; 1SCH. [HSSP ENTRY / PDB]
ModBase Q0D3N0.
Protein family/group databases
PeroxiBase 1122; OsPrx112.
Organism-specific databases
Gramene P37835; -.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q0D3N0.
Genome annotation databases
GeneID 4344279; -.
KEGG osa:4344279; -.
Other
ProtoNet Q0D3N0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Pyrrolidone carboxylic acid; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    23  23     Potential. 
CHAIN   24   314  291     Peroxidase 2. PRO_0000023754
ACT_SITE   65    65        Proton acceptor (By similarity). 
METAL   66    66        Calcium 1 (By similarity). 
METAL   69    69        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   71    71        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   73    73        Calcium 1 (By similarity). 
METAL   75    75        Calcium 1 (By similarity). 
METAL   187   187        Iron (heme axial ligand) (By similarity). 
METAL   188   188        Calcium 2 (By similarity). 
METAL   234   234        Calcium 2 (By similarity). 
METAL   237   237        Calcium 2 (By similarity). 
METAL   242   242        Calcium 2 (By similarity). 
BINDING   157   157        Substrate; via carbonyl oxygen (By similarity). 
SITE   61    61  1     Transition state stabilizer (By similarity). 
MOD_RES   24    24        Pyrrolidone carboxylic acid (Potential). 
CARBOHYD   148   148        N-linked (GlcNAc...) (Potential). 
CARBOHYD   169   169        N-linked (GlcNAc...) (Potential). 
CARBOHYD   203   203        N-linked (GlcNAc...) (Potential). 
CARBOHYD   274   274        N-linked (GlcNAc...) (Potential). 
CARBOHYD   309   309        N-linked (GlcNAc...) (Potential). 
DISULFID   34   109        By similarity. 
DISULFID   67    72        By similarity. 
DISULFID   115   310        By similarity. 
DISULFID   194   219        By similarity. 
Sequence information
Length: 314 AA [This is the length of the unprocessed precursor] Molecular weight: 32606 Da [This is the MW of the unprocessed precursor] CRC64: 232C874730D6C7FB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASASSVSLM LLVAAAMASA ASAQLSATFY DTSCPNALST IKSAVTAAVN SEPRMGASLV 

        70         80         90        100        110        120 
RLHFHDCFVQ GCDASVLLSG QEQNAGPNAG SLRGFNVVDN IKTQVEAICS QTVSCADILA 

       130        140        150        160        170        180 
VAARDSVVAL GGPSWTVLLG RRDSTTANES QANTDLPAPS SSLAELIGNF SRKGLDVTDM 

       190        200        210        220        230        240 
VALSGAHTIG QAQCQNFRDR LYNETNIDSS FATALKANCP RPTGSGDSNL APLDTTTPNA 

       250        260        270        280        290        300 
FDSAYYTNLL SNKGLLHSDQ VLFNGGSTDN TVRNFSSNTA AFNSAFTAAM VKMGNISPLT 

       310 
GTQGQIRLNC SKVN 

Q0D3N0 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!