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UniProtKB/Swiss-Prot entry Q0JEQ2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name APX3_ORYSJ
Primary accession number Q0JEQ2
Secondary accession numbers Q6TY83 Q7XWZ7
Integrated into Swiss-Prot on September 11, 2007
Sequence was last modified on October 3, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 20)
Name and origin of the protein
Protein name Probable L-ascorbate peroxidase 3
Synonyms EC 1.11.1.11
OsAPx03
Gene name
Name: APX3
OrderedLocusNames: Os04g0223300, LOC_Os04g14680
ORFNames: OSJNBb0072N21.2, OsJ_013310
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01183; PubMed=12447439 [NCBI, ExPASy, EBI, Israel, Japan]
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.;
"Sequence and analysis of rice chromosome 4.";
Nature 420:316-320(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[5]
NOMENCLATURE.
DOI=10.1007/s00239-004-2666-z; PubMed=15599508 [NCBI, ExPASy, EBI, Israel, Japan]
Teixeira F.K., Menezes-Benavente L., Margis R., Margis-Pinheiro M.;
"Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.";
J. Mol. Evol. 59:761-770(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL606634; CAD39836.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008210; BAF14185.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000141; EAZ29827.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001052271.1; -.
UniGene Os.4987
3D structure databases
HSSP P48534; 1APX. [HSSP ENTRY / PDB]
ModBase Q0JEQ2.
Protein family/group databases
PeroxiBase 1867; OsAPx03.
Organism-specific databases
Gramene Q6TY83; -.
Family and domain databases
InterPro IPR002207; Asc_perxdse.
IPR002016; Haem_peroxidase_pln/fun/bac.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00459; ASPEROXIDASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q0JEQ2.
Genome annotation databases
GeneID 4335202; -.
KEGG osa:4335202; -.
Other
ProtoNet Q0JEQ2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Heme; Hydrogen peroxide; Iron; Membrane; Metal-binding; Oxidoreductase; Peroxidase; Potassium; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   291  291     Probable L-ascorbate peroxidase 3. PRO_0000055595
TRANSMEM   263   283  21     Potential. 
ACT_SITE   41    41        Proton acceptor (By similarity). 
METAL   161   161        Iron (heme axial ligand) (By similarity). 
METAL   162   162        Potassium or calcium (By similarity). 
METAL   178   178        Potassium or calcium (By similarity). 
METAL   185   185        Potassium or calcium (By similarity). 
SITE   37    37  1     Transition state stabilizer (By similarity). 
Sequence information
Length: 291 AA [This is the length of the unprocessed precursor] Molecular weight: 32048 Da [This is the MW of the unprocessed precursor] CRC64: 53CCEA0D39781236 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSAAPVVDAE YMAEVERARR DLRALIASKS CAPIMLRLAW HDAGTYDKAT KTGGPNGSIR 

        70         80         90        100        110        120 
FPQEYSHAAN AGIKIAIDLL EPMKQKHPKI TYADLYQLAG VVAVEVTGGP TIDYVPGRRD 

       130        140        150        160        170        180 
SSDSPEEGRL PDAKKGAAHL REVFYRMGLS DKDIVALSGG HTLGKARPER SGFDGAWTKD 

       190        200        210        220        230        240 
PLKFDNSYFI ELLKENSEGL LKLPTDKALV EDPTFRRYVE LYAKDEDAFF RDYAESHKKL 

       250        260        270        280        290 
SELGFTPPRS AFIYKSCQKP KSLLMQTAAG VAVAAAVVAW AYLCESNKRL G 

Q0JEQ2 in FASTA format

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