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UniProtKB/Swiss-Prot entry Q13CD3

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HGD_RHOPS
Primary accession number Q13CD3
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on October 31, 2006 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 14)
Name and origin of the protein
Protein name Homogentisate 1,2-dioxygenase
Synonyms EC 1.13.11.5
Homogentisicase
Homogentisate oxygenase
Homogentisic acid oxidase
Gene name
Name: hmgA
OrderedLocusNames: RPD_1018
From
Rhodopseudomonas palustris (strain BisB5) [TaxID: 316057] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.;
"Complete sequence of Rhodopseudomonas palustris BisB5.";
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000283; ABE38256.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_568157.1; -.
3D structure databases
ModBase Q13CD3.
Enzyme and pathway databases
BioCyc RPAL316057:RPD_1018-MON; -.
Ontologies
GO
GO:0004411; Molecular function: homogentisate 1,2-dioxygenase activity (inferred from electronic annotation from HAMAP).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from HAMAP).
GO:0006559; Biological process: L-phenylalanine catabolic process (inferred from electronic annotation from HAMAP).
GO:0006572; Biological process: tyrosine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00334; -; 1.
PBIL [Tree]
InterPro IPR005708; Homogentis_dOase.
Graphical view of domain structure.
PANTHER PTHR11056; Homogentis_dOase; 1.
Pfam PF04209; HgmA; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01015; hmgA; 1.
BLOCKS Q13CD3.
Genome annotation databases
GeneID 4021493; -.
GenomeReviews CP000283_GR; RPD_1018.
KEGG rpd:RPD_1018; -.
Phylogenomic databases
HOGENOM Q13CD3; -.
Genome annotation databases
CMR Q13CD3; RPD_1018.
Other
ProtoNet Q13CD3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Dioxygenase; Iron; Metal-binding; Oxidoreductase; Phenylalanine catabolism; Tyrosine catabolism.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   448  448     Homogentisate 1,2-dioxygenase. PRO_1000019543
METAL   346   346        Iron (By similarity). 
METAL   352   352        Iron (By similarity). 
METAL   382   382        Iron (By similarity). 
Sequence information
Length: 448 AA [This is the length of the unprocessed precursor] Molecular weight: 49546 Da [This is the MW of the unprocessed precursor] CRC64: 2DAF089317B04E5C [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MNVNAAPEIV GRASQGVTPG YMSGFGNSFE TEALPGALPV GRNSPQRAAY GLYAEQLSGS 

        70         80         90        100        110        120 
PFTAPRGANE RSWLYRIRPS VKHSGRFAKA DMGLWRSAPC LEHDMPIAQL RWDAPPMPTE 

       130        140        150        160        170        180 
EVTFVQGVRT MTTAGDVNTQ AGMAAHMYLI SRSMVDQHFY NADGELMFVP QQGRLRLVTE 

       190        200        210        220        230        240 
FGVIAIEPAE IAVIPRGVKF RVELVDGPAR GYLCENYGGA FTLPERGPIG ANCLANSRDF 

       250        260        270        280        290        300 
LTPVASYEDK DTPTELFVKW GGALWRTSLP HSPIDVVAWH GNYAPYKYDL RTFSPVGAIG 

       310        320        330        340        350        360 
FDHPDPSIFT VLTSPSETAG TANIDFVIFP ERWMVAENTF RPPWYHMNIM SEFMGLIYGV 

       370        380        390        400        410        420 
YDAKPQGFAP GGASLHNMML PHGPDREAFD HASNGELKPV KLTGTMAFML ETRYPQRVTE 

       430        440 
YAATADTLQD DYADCWRGLE KRFDPSRP
Q13CD3 in FASTA format

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