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UniProtKB/Swiss-Prot entry Q13VE3


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA_BURXL
Primary accession number Q13VE3
Secondary accession numbers None
Integrated into Swiss-Prot on February 5, 2008
Sequence was last modified on August 22, 2006 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 18)
Name and origin of the protein
Protein name D-amino acid dehydrogenase small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA
OrderedLocusNames: Bxeno_A3408
ORFNames: Bxe_A1001
From
Burkholderia xenovorans (strain LB400) [TaxID: 266265] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0606924103; PubMed=17030797 [NCBI, ExPASy, EBI, Israel, Japan]
Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., Tiedje J.M.;
"Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.";
Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000270; ABE31946.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_559998.1; -.
3D structure databases
ModBase Q13VE3.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
BLOCKS Q13VE3.
Genome annotation databases
GeneID 4003991; -.
GenomeReviews CP000270_GR; Bxeno_A3408.
KEGG bxe:Bxe_A1001; -.
Phylogenomic databases
HOGENOM Q13VE3; -.
Genome annotation databases
CMR Q13VE3; Bxeno_A3408.
Other
ProtoNet Q13VE3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   429  429     D-amino acid dehydrogenase small subunit. PRO_1000066086
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 429 AA [This is the length of the unprocessed precursor] Molecular weight: 46194 Da [This is the MW of the unprocessed precursor] CRC64: CDB9833D372207EB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRVVVLGSGV VGVTSAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YASPWAAPGV 

        70         80         90        100        110        120 
PLKAVKWMFQ KHAPLAIRLD GTQFQLQWMW QMLQNCTSSR YAVNKGRMVR LAEYSRDCLQ 

       130        140        150        160        170        180 
ALRAETGIQY EGRTGGTLQV FRTQQQFEGA AKDIAVLREA SVPYELLSPA ELAQAEPALA 

       190        200        210        220        230        240 
AVSHKLTGGL RLPGDETGDC QMFTTRLAAL AEQLGVKFRY NTPIDALAMA GDRIAGVKCG 

       250        260        270        280        290        300 
EELVRADSFV VALGSYSTQF LSGLVKIPVY PLKGYSITAP IVNEASAPVS TVLDETYKIA 

       310        320        330        340        350        360 
ITRFDDRIRV GGMAEIVGFD KSLREARRET LELCVNDLFP GGGDTSKATF WSGLRPMTPD 

       370        380        390        400        410        420 
GTPIVGRTPV ANLFLNTGHG TLGWTMSCGS GQLLADVMSG KQPAIKADDL SVHRYLGETR 


GAHRPAYAA 

Q13VE3 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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