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UniProtKB/Swiss-Prot entry Q28ED0

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSA_XENTR
Primary accession number Q28ED0
Secondary accession number A4QNI5
Integrated into Swiss-Prot on January 23, 2007
Sequence was last modified on April 4, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 25)
Name and origin of the protein
Protein name Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Precursor]
Synonyms EC 1.3.5.1
Flavoprotein subunit of complex II
Fp
Gene name
Name: sdha
ORFNames: TNeu107a09.1
From
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [TaxID: 8364] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Neurula;
Sanger Xenopus tropicalis EST/cDNA project;
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Embryo;
NIH - Xenopus Gene Collection (XGC) project;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CR848322; CAJ83256.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC135730; AAI35731.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001015989.1; -.
UniGene Str.9006
3D structure databases
SMR Q28ED0; 56-665.
ModBase Q28ED0.
Family and domain databases
InterPro IPR003953; FAD_bind2_N.
IPR013027; FAD_pyr_nucl-diS_OxRdtase.
IPR003952; FRD_SDH_FAD_BS.
IPR004112; Fum_Rdtase/Succ_DHase_flav_C.
IPR011281; Succ_DHase_flav_su_fwd.
IPR014006; Succ_Dhase_frdA_Gneg.
Graphical view of domain structure.
Pfam PF00890; FAD_binding_2; 1.
PF02910; Succ_DH_flav_C; 1.
Pfam graphical view of domain structure.
PRINTS PR00368; FADPNR.
TIGRFAMs TIGR01816; sdhA_forward; 1.
TIGR01812; sdhA_frdA_Gneg; 1.
PROSITE PS00504; FRD_SDH_FAD_BINDING; 1.
BLOCKS Q28ED0.
Genome annotation databases
GeneID 548743; -.
KEGG xtr:548743; -.
Phylogenomic databases
HOVERGEN Q28ED0; -.
Other
ProtoNet Q28ED0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Electron transport; FAD; Flavoprotein; Membrane; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Transit peptide; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    43  43     Mitochondrion (Potential). 
CHAIN   44   665  622     Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial. PRO_0000272307
NP_BIND   94   109  16     FAD (By similarity). 
ACT_SITE   343   343        Proton acceptor (By similarity). 
BINDING   299   299        Substrate (By similarity). 
BINDING   311   311        Substrate (By similarity). 
BINDING   410   410        Substrate (By similarity). 
BINDING   454   454        Substrate (By similarity). 
MOD_RES   102   102        Tele-8alpha-FAD histidine (By similarity). 
Sequence information
Length: 665 AA [This is the length of the unprocessed precursor] Molecular weight: 72706 Da [This is the MW of the unprocessed precursor] CRC64: 6C0A8263F91E0649 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MAFLNVASSR LLSKTLQLGG RVQNCTATCT AATRNFHFSV YGRKDTSAKL SDSISTQYPV 

        70         80         90        100        110        120 
VDHDFDAVVV GAGGAGLRAA FGLSEAGFNT ACITKLFPTR SHTVAAQGGI NAALGNMEDD 

       130        140        150        160        170        180 
DWRWHFYDTV KGSDWLGDQD AIHYMTEQAP ASVIELENYG MPFSRTEQGK IYQRAFGGQS 

       190        200        210        220        230        240 
LKFGKGGQAH RCCCVADRTG HSLLHTLYGR SLRYDTSYFV EYFALDLLME NGECRGVIAL 

       250        260        270        280        290        300 
CMEDGSIHRF RAKNTVIATG GYGRTFFSCT SAHTCTGDGT AMVTRAGLPC QDLEFVQFHP 

       310        320        330        340        350        360 
TGIYGAGCLI TEGCRGEGGI LINSEGERFM ERYAPVAKDL ASRDVVSRSM TIEIREGRGC 

       370        380        390        400        410        420 
GKDKDHVYLQ LHHLPPSQLA SRLPGISETA MIFAGVDVTK EPIPVLPTVH YNMGGIPTNY 

       430        440        450        460        470        480 
KGQVITHVNG EDRVVPGLYA CGEAASASVH GANRLGANSL LDLVVFGRAC ALSIAESCKP 

       490        500        510        520        530        540 
GEPVPSIKEN AGEESVANLD KLRFTNGSTR TSELRINMQK TMQNHAAVFR TGSVLKEGCE 

       550        560        570        580        590        600 
KLSAINSTMD DIKTFDRGIV WNTDLVETLE LQNLMLCALQ TIYGAEARKE SRGAHAREDY 

       610        620        630        640        650        660 
KVRIDEYDYS KPIQGQQKKS FSEHWRKHTL SYVDGKGKVS LEYRPVIDTT LNEDCVSVPP 


AIRSY
Q28ED0 in FASTA format

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