NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.;
"Complete sequence of chromosome 2 of Rhodobacter sphaeroides 2.4.1.";
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.

Comments

FUNCTION: Oxidative deamination of D-amino acids (By similarity).
CATALYTIC ACTIVITY: A D-amino acid + H₂O + acceptor = a 2-oxo acid + NH₃ + reduced acceptor.
COFACTOR: FAD (By similarity).
PATHWAY: Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1 .
SUBUNIT: Heterodimer of a small and a large subunit (By similarity).
SIMILARITY: Belongs to the dadA oxidoreductase family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

CP000144; ABA80728.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

YP_354629.1; -.

3D structure databases

ModBase

Q3IXK6.

Enzyme and pathway databases

BioCyc

RSPH272943:RSP_3113-MON; -.

Ontologies

GO:0008718;	Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524;	Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.

Family and domain databases

HAMAP

MF_01202; -; 1.
PBIL [Tree]

InterPro

IPR006076; FAD-dep_OxRdtase.
IPR006036; K_uptake_TrkA.
Graphical view of domain structure.

Pfam

PF01266; DAO; 1.
Pfam graphical view of domain structure.

PRINTS

PR00335; KUPTAKETRKA.

BLOCKS

Q3IXK6.

Genome annotation databases

GeneID

3721388; -.

GenomeReviews

CP000144_GR; RHOS4_31600.

KEGG

rsp:RSP_3113; -.

NMPDR

fig|272943.3.peg.3123; -.

Phylogenomic databases

HOGENOM

Q3IXK6; -.

Genome annotation databases

CMR

Q3IXK6; RHOS4_31600.

Other

ProtoNet

Q3IXK6.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; FAD; Flavoprotein; Oxidoreductase.

Features

Feature table viewer

`Key`	`From To`	`Length`	`Description`	`FTId`
`CHAIN`	`1 436`	`436`	`D-amino acid dehydrogenase small subunit.`	`PRO_1000066112`
`NP_BIND`	`3 17`	`15`	`FAD (Potential).`

Sequence information

Length: 436 AA [This is the length of the unprocessed precursor]

Molecular weight: 46151 Da [This is the MW of the unprocessed precursor]

CRC64: CAE52B673FC38B0B [This is a checksum on the sequence]

        10         20         30         40         50         60 
MRIVVLGAGV VGVTSAYELA RAGHEVTVVD RQPAAALETS FANAGEISPG YASPWAAPGI 

        70         80         90        100        110        120 
PAKALRWMFM KHAPLVIRPR LDAAQVRFLL AILRNCTPAA YAQNKGRMVR LAEYSRDCLT 

       130        140        150        160        170        180 
DLRATTGLAF DERQQGTLQL FRSQKQLDAA ARDIEVLRAG GVPFELLDAD GCLAAEPGLR 

       190        200        210        220        230        240 
AARDRIAGGL RLTGDETGDC FKFTQGLAGL AEEGGVRFRY GTGVERLRVE GGRVTGVETT 

       250        260        270        280        290        300 
KGTFLADAVV VALGSHSPAL VAPLGLRLPV YPVKGYSITV PIVDADRAPV STVMDETYKI 

       310        320        330        340        350        360 
AITRLGTRIR VGGMAEVAGF SATLPPARRE TLAMSVNDLF GGAGDLSRAS FWTGLRPMTP 

       370        380        390        400        410        420 
DGTPVVGRTP VAGLWLNTGH GTLGWTMAAG SARVLSDLID GRAPEIESAD LGIERYAAPG 

       430 
RRARPAVRLN PARQAG

Q3IXK6 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools