NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.;
"Complete sequence of Dechloromonas aromatica RCB.";
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.

Comments

FUNCTION: Oxidative deamination of D-amino acids (By similarity).
CATALYTIC ACTIVITY: A D-amino acid + H₂O + acceptor = a 2-oxo acid + NH₃ + reduced acceptor.
COFACTOR: FAD (By similarity).
PATHWAY: Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1 .
SUBUNIT: Heterodimer of a small and a large subunit (By similarity).
SIMILARITY: Belongs to the dadA oxidoreductase family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

CP000089; AAZ48570.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

YP_287040.1; -.

3D structure databases

ModBase

Q479B1.

Enzyme and pathway databases

BioCyc

DARO159087:DARO_3842-MON; -.

Ontologies

GO:0008718;	Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524;	Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.

Family and domain databases

HAMAP

MF_01202; -; 1.
PBIL [Tree]

InterPro

IPR006076; FAD-dep_OxRdtase.
Graphical view of domain structure.

Pfam

PF01266; DAO; 1.
Pfam graphical view of domain structure.

BLOCKS

Q479B1.

Genome annotation databases

GeneID

3568013; -.

GenomeReviews

CP000089_GR; Daro_3842.

KEGG

dar:Daro_3842; -.

NMPDR

fig|159087.4.peg.2586; -.

Phylogenomic databases

HOGENOM

Q479B1; -.

Genome annotation databases

CMR

Q479B1; Daro_3842.

Other

ProtoNet

Q479B1.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; FAD; Flavoprotein; Oxidoreductase.

Features

Feature table viewer

`Key`	`From To`	`Length`	`Description`	`FTId`
`CHAIN`	`1 418`	`418`	`D-amino acid dehydrogenase small subunit.`	`PRO_1000066089`
`NP_BIND`	`3 17`	`15`	`FAD (Potential).`

Sequence information

Length: 418 AA [This is the length of the unprocessed precursor]

Molecular weight: 45831 Da [This is the MW of the unprocessed precursor]

CRC64: 03A283AF0EA0CD3B [This is a checksum on the sequence]

        10         20         30         40         50         60 
MRVLVLGAGV VGTTSAWYLA RAGHQVTVVD RQPVAGNETS FANGGQISVS HAEPWANPHV 

        70         80         90        100        110        120 
LPRVLKWLGR EDAPLLWRWR ADPAQLAWGL RFLGECFPGR VRRNIAAIVS MALYSRGRLQ 

       130        140        150        160        170        180 
ALREELGLQY DHLERGILHI YTDRDEFSAA LDAARVMRQF GLDRDTVDVD KCLEIEPALS 

       190        200        210        220        230        240 
GARHLLVGGD YTRSDESGDA NKFTCALAEH AKAAGVDFRY GLTVERIATS GSEIVGVLVQ 

       250        260        270        280        290        300 
HSEGGPERLT ADAYVVALGS YSPLLLRPIG VGLPVYPAKG YSATLTLAEA SLAPTVSLTD 

       310        320        330        340        350        360 
DERKLVFSRL GNRLRIAGTA EFNGYNLELN PVRCQALIDR TRQLFPRLEI VGEPTLWCGL 

       370        380        390        400        410 
RPATPSNVPY IGQTRYRNLW LNTGHGTLGW TMACGSAASL AEMISGRRPE PEFPFLRC

Q479B1 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools