NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.;
"Complete sequence of Dechloromonas aromatica RCB.";
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.

Comments

CATALYTIC ACTIVITY: Coproporphyrinogen-III + O₂ + 2 H⁺ = protoporphyrinogen-IX + 2 CO₂ + 2 H₂O.
PATHWAY: Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen III (O2 route): step 1/1 .
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the aerobic coproporphyrinogen III oxidase family.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

CP000089; AAZ48398.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

YP_286868.1; -.

3D structure databases

ModBase

Q479T3.

Enzyme and pathway databases

BioCyc

DARO159087:DARO_3669-MON; -.

Ontologies

GO:0005737;	Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109;	Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0006779;	Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.

Family and domain databases

HAMAP

MF_00333; -; 1.
PBIL [Tree]

InterPro

IPR001260; Coprogen_oxidas.
Graphical view of domain structure.

Gene3D

G3DSA:3.40.1500.10; Coprogen_oxidas; 1.

PANTHER

PTHR10755; Coprogen_oxidas; 1.

Pfam

PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF000166; Coproporphyri_ox; 1.

PRINTS

PR00073; COPRGNOXDASE.

PROSITE

PS01021; COPROGEN_OXIDASE; 1.

BLOCKS

Q479T3.

Genome annotation databases

GeneID

3566781; -.

GenomeReviews

CP000089_GR; Daro_3669.

KEGG

dar:Daro_3669; -.

NMPDR

fig|159087.4.peg.3191; -.

Phylogenomic databases

HOGENOM

Q479T3; -.

Genome annotation databases

CMR

Q479T3; Daro_3669.

Other

ProtoNet

Q479T3.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.

Features

Feature table viewer

`Key`	`From To`	`Length`		`Description`	`FTId`
`CHAIN`	`1 298`	`298`		`Coproporphyrinogen III oxidase, aerobic.`	`PRO_1000019467`

Sequence information

Length: 298 AA [This is the length of the unprocessed precursor]

Molecular weight: 34231 Da [This is the MW of the unprocessed precursor]

CRC64: BB21B8689491EB94 [This is a checksum on the sequence]

        10         20         30         40         50         60 
MDTTRLKDFF TGLQSRIVAE LEAFDGQPFR TDSWVRPEGG GGISRLIEEG DFFERGGVNF 

        70         80         90        100        110        120 
SHVTGKSLPA SATAVRPQLA GRSWEAMGVS LVLHPRNPYC PTAHMNVRCF VASKEGEEDV 

       130        140        150        160        170        180 
WWFGGGMDMT PYYGQREDVV HFHQTCKDAL APFGDEVYPK YKHWCDEYFF LKHRNEPRGV 

       190        200        210        220        230        240 
GGVFFDDLNE GGFERCFELT QAVGNAFTKA YLPVLAKRRE MPYDERERDF QAYRRGRYVE 

       250        260        270        280        290 
FNLVWDRGTL FGLQSGGRTE SILMSLPPIV KWRYDWQPEA GSPEAELYEV FLKPQDWA

Q479T3 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools