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UniProtKB/Swiss-Prot entry Q47XD5

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name E4PD_COLP3
Primary accession number Q47XD5
Secondary accession numbers None
Integrated into Swiss-Prot on July 10, 2007
Sequence was last modified on September 13, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 22)
Name and origin of the protein
Protein name D-erythrose-4-phosphate dehydrogenase
Synonyms E4PDH
EC 1.2.1.72
Gene name
Name: epd
OrderedLocusNames: CPS_3873
From
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [TaxID: 167879] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0504766102; PubMed=16043709 [NCBI, ExPASy, EBI, Israel, Japan]
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M., Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M.;
"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.";
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000083; AAZ24567.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_270535.1; -.
3D structure databases
ModBase Q47XD5.
Enzyme and pathway databases
BioCyc CPSY167879:CPS_3873-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0048001; Molecular function: erythrose-4-phosphate dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0042823; Biological process: pyridoxal phosphate biosynthetic process (inferred from electronic annotation from HAMAP).
GO:0008615; Biological process: pyridoxine biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01640; -; 1.
PBIL [Tree]
InterPro IPR006422; E4P_DHase_bac.
IPR000173; GlycerAld_3-P_DHase.
Graphical view of domain structure.
PANTHER PTHR10836; GAP_DH; 1.
Pfam PF02800; Gp_dh_C; 1.
PF00044; Gp_dh_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000149; GAP_DH; 1.
PRINTS PR00078; G3PDHDRGNASE.
TIGRFAMs TIGR01532; E4PD_g-proteo; 1.
PROSITE PS00071; GAPDH; FALSE_NEG.
BLOCKS Q47XD5.
Genome annotation databases
GeneID 3519039; -.
GenomeReviews CP000083_GR; CPS_3873.
KEGG cps:CPS_3873; -.
NMPDR fig|167879.3.peg.3513; -.
TIGR CPS_3873; -.
Phylogenomic databases
HOGENOM Q47XD5; -.
Other
ProtoNet Q47XD5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; NAD; Oxidoreductase; Pyridoxine biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   339  339     D-erythrose-4-phosphate dehydrogenase. PRO_0000293145
NP_BIND   12    13  2     NAD (By similarity). 
REGION   154   156  3     Substrate binding (Potential). 
REGION   213   214  2     Substrate binding (Potential). 
ACT_SITE   155   155        Nucleophile (By similarity). 
BINDING   236   236        Substrate (Potential). 
BINDING   319   319        NAD (By similarity). 
SITE   182   182  1     Activates thiol group during catalysis (By similarity). 
Sequence information
Length: 339 AA [This is the length of the unprocessed precursor] Molecular weight: 37222 Da [This is the MW of the unprocessed precursor] CRC64: C5220CA76AD269FD [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTIRIAINGF GRIGRSVVRA LYESGKTDLF TLVSINELAP ASGIAHLLKY DSTHGRFPFS 

        70         80         90        100        110        120 
VSEKENQLII NGDEIALTHI GNLNSLPWQQ QNIDIVLDCT GKYGNKADGL SHINRGAKKV 

       130        140        150        160        170        180 
LFSHPGSQDI DATIIYGINH QTLTSSDRVV SNGSCTTNCI VPVIKVIDEA FGVESGSITT 

       190        200        210        220        230        240 
IHSSMHDQQV IDAYHKDLRL SRAASQSIIP VDTKLAAGIE RILPKFKGRF EAIAVRVPTI 

       250        260        270        280        290        300 
NVTAMDLSLT VNNDVCICDI NQAIQAATSN HDLYGVLSYT EEPLVSVDFN HDPHSCIVDG 

       310        320        330 
NQTRVSHKRL IKMLVWCDNE WGFANRMLDT AMAMHQAEN
Q47XD5 in FASTA format

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