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UniProtKB/Swiss-Prot entry Q5QVL6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name E4PD_IDILO
Primary accession number Q5QVL6
Secondary accession numbers None
Integrated into Swiss-Prot on July 10, 2007
Sequence was last modified on January 4, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 29)
Name and origin of the protein
Protein name D-erythrose-4-phosphate dehydrogenase
Synonyms E4PDH
EC 1.2.1.72
Gene name
Name: epd
OrderedLocusNames: IL2213
From
Idiomarina loihiensis [TaxID: 135577] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=L2-TR / ATCC BAA-735 / DSM 15497;
DOI=10.1073/pnas.0407638102; PubMed=15596722 [NCBI, ExPASy, EBI, Israel, Japan]
Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y., Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S., Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S., Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
"Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy.";
Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE017340; AAV83045.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_156594.1; -.
3D structure databases
ModBase Q5QVL6.
Enzyme and pathway databases
BioCyc ILOI283942:IL2213-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0048001; Molecular function: erythrose-4-phosphate dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0042823; Biological process: pyridoxal phosphate biosynthetic process (inferred from electronic annotation from HAMAP).
GO:0008615; Biological process: pyridoxine biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01640; -; 1.
PBIL [Tree]
InterPro IPR006422; E4P_DHase_bac.
IPR000173; GlycerAld_3-P_DHase.
Graphical view of domain structure.
PANTHER PTHR10836; GAP_DH; 1.
Pfam PF02800; Gp_dh_C; 1.
PF00044; Gp_dh_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000149; GAP_DH; 1.
PRINTS PR00078; G3PDHDRGNASE.
TIGRFAMs TIGR01532; E4PD_g-proteo; 1.
PROSITE PS00071; GAPDH; FALSE_NEG.
BLOCKS Q5QVL6.
Genome annotation databases
GeneID 3174021; -.
GenomeReviews AE017340_GR; IL2213.
KEGG ilo:IL2213; -.
NMPDR fig|283942.3.peg.2200; -.
Phylogenomic databases
HOGENOM Q5QVL6; -.
Genome annotation databases
CMR Q5QVL6; IL2213.
Other
ProtoNet Q5QVL6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; NAD; Oxidoreductase; Pyridoxine biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   341  341     D-erythrose-4-phosphate dehydrogenase. PRO_0000293150
NP_BIND   14    15  2     NAD (By similarity). 
REGION   156   158  3     Substrate binding (Potential). 
REGION   215   216  2     Substrate binding (Potential). 
ACT_SITE   157   157        Nucleophile (By similarity). 
BINDING   202   202        Substrate (Potential). 
BINDING   238   238        Substrate (Potential). 
BINDING   320   320        NAD (By similarity). 
SITE   184   184  1     Activates thiol group during catalysis (By similarity). 
Sequence information
Length: 341 AA [This is the length of the unprocessed precursor] Molecular weight: 37680 Da [This is the MW of the unprocessed precursor] CRC64: 5E307654A8D8D1B8 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSEPARIAIN GFGRIGRSFL RALYENGYRD SVQVVLINEP AASEAIAHLL KYDSSHGRFG 

        70         80         90        100        110        120 
EKVTQSGDAL TVAGDNIALT HQTEIEAIDW RAHEVDFVVD CTGVFGSQAD GQLYLQQGVK 

       130        140        150        160        170        180 
RVLFSHPGKP DVDFTAIYGV NEKELTVDHK VVSNGSCTTN CIVPVIKVLD DAFGIDSGAI 

       190        200        210        220        230        240 
TTIHSAMHDQ QVIDAYHPDL RRTRAAGRSI IPVDTRLARG IERILPHLEG RFEAIAVRVP 

       250        260        270        280        290        300 
TTNVTAMDLS VTLNSDATIE QINQVLREQS ERQLAGILDY TEEPLVSIDF NHDPHSSIVD 

       310        320        330        340 
GTQTRVSHKR LVKLLCWCDN EWGFANRLLD TAKTMAEQTE H
Q5QVL6 in FASTA format

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