ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q5QXJ4


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name HEM6_IDILO
Primary accession number Q5QXJ4
Secondary accession numbers None
Integrated into Swiss-Prot on April 12, 2005
Sequence was last modified on January 4, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 29)
Name and origin of the protein
Protein name Coproporphyrinogen 3 oxidase, aerobic
Synonyms EC 1.3.3.3
Coproporphyrinogen III oxidase, aerobic
Coproporphyrinogenase
Coprogen oxidase
Gene name
Name: hemF
OrderedLocusNames: IL0023
From
Idiomarina loihiensis [TaxID: 135577] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=L2-TR / ATCC BAA-735 / DSM 15497;
DOI=10.1073/pnas.0407638102; PubMed=15596722 [NCBI, ExPASy, EBI, Israel, Japan]
Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y., Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S., Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S., Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
"Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy.";
Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE017340; AAV80867.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_154416.1; -.
3D structure databases
ModBase Q5QXJ4.
Enzyme and pathway databases
BioCyc ILOI283942:IL0023-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109; Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0006779; Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00333; -; 1.
PBIL [Tree]
InterPro IPR001260; Coprogen_oxidas.
Graphical view of domain structure.
Gene3D G3DSA:3.40.1500.10; Coprogen_oxidas; 1.
PANTHER PTHR10755; Coprogen_oxidas; 1.
Pfam PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000166; Coproporphyri_ox; 1.
PRINTS PR00073; COPRGNOXDASE.
PROSITE PS01021; COPROGEN_OXIDASE; 1.
BLOCKS Q5QXJ4.
Genome annotation databases
GeneID 3173121; -.
GenomeReviews AE017340_GR; IL0023.
KEGG ilo:IL0023; -.
NMPDR fig|283942.3.peg.73; -.
Phylogenomic databases
HOGENOM Q5QXJ4; -.
Genome annotation databases
CMR Q5QXJ4; IL0023.
Other
ProtoNet Q5QXJ4.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   304  304     Coproporphyrinogen 3 oxidase, aerobic. PRO_0000109899
Sequence information
Length: 304 AA [This is the length of the unprocessed precursor] Molecular weight: 35113 Da [This is the MW of the unprocessed precursor] CRC64: DB7F81B4B9B414AF [This is a checksum on the sequence]
        10         20         30         40         50         60 
MHNDYLKQVK SYLMSLQDAI CQQLAQADGE QSFQEDSWDR PGGGGGRSRI MKNGAVFEQG 

        70         80         90        100        110        120 
GVGFSHVYGE KMPASATAHR PELEGRDFNA CGVSLVMHPE NPMVPTVHMN VRFFIAQKEG 

       130        140        150        160        170        180 
EEPVWWFGGG FDLTPFYPFD QDIIEWHQQA KNALDSVDEK LYPEYKAWCD DYFFLKHRDE 

       190        200        210        220        230        240 
ARGVGGIFFD DLNDRSFDEC FSVIKAVGDA FTKAYLPIVE RRKNLAYTQQ QRDFQLYRRG 

       250        260        270        280        290        300 
RYVEFNLVWD RGTLFGLQTG GRTESILMSM PPLARWEYNW QAEPGSAEEQ LTEYYLKPRD 


WLSV 

Q5QXJ4 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!