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UniProtKB/Swiss-Prot entry Q75ZX4


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ADH1_ORYSI
Primary accession number Q75ZX4
Secondary accession number P20306
Integrated into Swiss-Prot on June 12, 2007
Sequence was last modified on July 5, 2004 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 42)
Name and origin of the protein
Protein name Alcohol dehydrogenase 1
Synonym EC 1.1.1.1
Gene name
Name: ADH1
ORFNames: OsI_034290
From
Oryza sativa subsp. indica (Rice) [TaxID: 39946] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. IR26;
TISSUE=Seedling;
DOI=10.1007/BF00027335; PubMed=2562760 [NCBI, ExPASy, EBI, Israel, Japan]
Xie Y., Wu R.;
"Rice alcohol dehydrogenase genes: anaerobic induction, organ specific expression and characterization of cDNA clones.";
Plant Mol. Biol. 13:53-68(1989).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1007/s00122-004-1752-3; PubMed=15480535 [NCBI, ExPASy, EBI, Israel, Japan]
Yoshida K., Miyashita N.T., Ishii T.;
"Nucleotide polymorphism in the Adh1 locus region of the wild rice Oryza rufipogon.";
Theor. Appl. Genet. 109:1406-1416(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. 93-11;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X16296; CAA34363.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB118962; BAC87776.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000136; EAY80331.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JQ0474; JQ0474.
3D structure databases
HSSP P11766; 1M6H. [HSSP ENTRY / PDB]
ModBase Q75ZX4.
Organism-specific databases
Gramene Q75ZX4; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0004022; Molecular function: alcohol dehydrogenase activity (inferred from electronic annotation from EC).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR013154; AlcDHase_GroES-like.
IPR002085; AlcDHase_SF_Zn.
IPR013149; AlcDHase_Zn-bd.
IPR002328; AlcDHase_Zn_CS.
Graphical view of domain structure.
PANTHER PTHR11695; ADH_Sf_Zn; 1.
Pfam PF08240; ADH_N; 1.
PF00107; ADH_zinc_N; 1.
Pfam graphical view of domain structure.
PROSITE PS00059; ADH_ZINC; 1.
ProtoNet Q75ZX4.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Metal-binding; NAD; Oxidoreductase; Zinc.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   379  379     Alcohol dehydrogenase 1. PRO_0000291461
METAL   47    47        Zinc 1; catalytic (By similarity). 
METAL   69    69        Zinc 1; catalytic (By similarity). 
METAL   100   100        Zinc 2 (By similarity). 
METAL   102   102        Zinc 2 (By similarity). 
METAL   105   105        Zinc 2 (By similarity). 
METAL   113   113        Zinc 2 (By similarity). 
METAL   177   177        Zinc 1; catalytic (By similarity). 
CONFLICT   19    19        A -> G (in Ref. 1; CAA34363). 
CONFLICT   23    23        V -> S (in Ref. 1; CAA34363). 
CONFLICT   31    34        PPQA -> KE (in Ref. 1; CAA34363). 
CONFLICT   144   144        V -> I (in Ref. 1; CAA34363). 
CONFLICT   192   192        Missing (in Ref. 1; CAA34363). 
CONFLICT   217   217        A -> R (in Ref. 1; CAA34363). 
CONFLICT   291   291        V -> I (in Ref. 1; CAA34363). 
CONFLICT   370   370        G -> A (in Ref. 1; CAA34363). 
Sequence information
Length: 379 AA [This is the length of the unprocessed precursor] Molecular weight: 40984 Da [This is the MW of the unprocessed precursor] CRC64: 1281E87F3DB30545 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MATAGKVIKC KAAVAWEAAK PLVIEEVEVA PPQAMEVRVK ILFTSLCHTD VYFWEAKGQT 

        70         80         90        100        110        120 
PVFPRIFGHE AGGIVESVGE GVTDLAPGDH VLPVFTGECK ECAHCKSAES NMCDLLRINT 

       130        140        150        160        170        180 
DRGVMIGDGK SRFSINGKPI YHFVGTSTFS EYTVMHVGCV AKINPAAPLD KVCVLSCGIS 

       190        200        210        220        230        240 
TGLGATINVA KPPKGSTVAI FGLGAVGLAA AEGARIAGAS RIIGIDLNAN RFEEARKFGC 

       250        260        270        280        290        300 
TEFVNPKDHD KPVQQVLAEM TNGGVDRSVE CTGNINAMIQ AFECVHDGWG VAVLVGVPHK 

       310        320        330        340        350        360 
DAEFKTHPMN FLNERTLKGT FFGNYKPRTD LPNVVELYMK KELEVEKFIT HSVPFSEINT 

       370 
AFDLMHKGEG IRCIIRMEN 

Q75ZX4 in FASTA format

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