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UniProtKB/Swiss-Prot entry Q7W641


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA_BORPA
Primary accession number Q7W641
Secondary accession numbers None
Integrated into Swiss-Prot on January 16, 2004
Sequence was last modified on October 1, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 28)
Name and origin of the protein
Protein name D-amino acid dehydrogenase small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA
OrderedLocusNames: BPP3086
From
Bordetella parapertussis [TaxID: 519] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=12822 / ATCC BAA-587 / NCTC 13253;
DOI=10.1038/ng1227; PubMed=12910271 [NCBI, ExPASy, EBI, Israel, Japan]
Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.;
"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.";
Nat. Genet. 35:32-40(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BX640432; CAE38373.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_885265.1; -.
3D structure databases
ModBase Q7W641.
Enzyme and pathway databases
BioCyc BPAR257311:BPP3086-MON; -.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS Q7W641.
Genome annotation databases
GeneID 1664791; -.
GenomeReviews BX470249_GR; BPP3086.
KEGG bpa:BPP3086; -.
NMPDR fig|257311.1.peg.2899; -.
Phylogenomic databases
HOGENOM Q7W641; -.
Genome annotation databases
CMR Q7W641; BPP3086.
Other
ProtoNet Q7W641.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   434  434     D-amino acid dehydrogenase small subunit. PRO_0000166126
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 434 AA [This is the length of the unprocessed precursor] Molecular weight: 46907 Da [This is the MW of the unprocessed precursor] CRC64: 5F76538233788D22 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MHVIVLGSGV IGTTTAYYLA RQGAQVTVLE RRAGPADETS YGNAGQVSPG YSTPWAAPGI 

        70         80         90        100        110        120 
PLKALKWMFQ KHAPLAIRAD GSFYQWRWLA AMLANCSAGR YSVNKERMLR LAEYSRDCLR 

       130        140        150        160        170        180 
TLRADTGIQY EQRTQGTLQL FRTAAQMEAA RRDIAVLEEC GVPYELLDRN RLPTAEPALA 

       190        200        210        220        230        240 
RALDKLAGGL RLPNDETGDC RRFTLQLADK AKALGVQFRF NQQVEGLDVR GGQVAGVRVG 

       250        260        270        280        290        300 
GEQLAADCYV AAFGSYTRGF LRPLGLDLPV YPVKGYSLTI PMTDESAAPV STILDETYKV 

       310        320        330        340        350        360 
AVTRFDQRIR VGGMAELAGF DLRLKEARRK TLELVVNDLS PGSGAVEQAE FWTGLRPMTP 

       370        380        390        400        410        420 
DSTPIIGATK YGNLFLNTGH GTLGWTMACG SGQLVADQVC GRQPAIRADD LALSRYGAGG 

       430 
QAGGGVARAQ HNAA 

Q7W641 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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