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UniProtKB/Swiss-Prot entry Q9FJR1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PER65_ARATH
Primary accession number Q9FJR1
Secondary accession number Q8RWF3
Integrated into Swiss-Prot on December 6, 2002
Sequence was last modified on December 6, 2002 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 60)
Name and origin of the protein
Protein name Peroxidase 65 [Precursor]
Synonyms Atperox P65
EC 1.11.1.7
ATP43
Gene name
Name: PER65
Synonyms: P65
OrderedLocusNames: At5g47000
ORFNames: MQD22.14
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.3.203; PubMed=9734815 [NCBI, ExPASy, EBI, Israel, Japan]
Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones.";
DNA Res. 5:203-216(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[4]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1016/S0378-1119(02)00465-1; PubMed=12034502 [NCBI, ExPASy, EBI, Israel, Japan]
Tognolli M., Penel C., Greppin H., Simon P.;
"Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.";
Gene 288:129-138(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB013394; BAB10239.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY093131; AAM13130.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT008821; AAP68260.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY088108; AAM65654.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_568674.1; -.
UniGene At.29916
3D structure databases
HSSP Q39034; 1QGJ. [HSSP ENTRY / PDB]
ModBase Q9FJR1.
Protein family/group databases
PeroxiBase 231; AtPrx65.
Organism-specific databases
GeneFarm 1924; 61.
TAIR At5g47000; -.
Gene expression databases
ArrayExpress Q9FJR1; -.
GermOnline AT5G47000; Arabidopsis thaliana.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9FJR1.
Genome annotation databases
GeneID 834746; -.
GenomeReviews BA000015_GR; AT5G47000.
KEGG ath:AT5G47000; -.
NMPDR fig|3702.1.peg.26498; -.
Other
ProtoNet Q9FJR1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    28  28     Potential. 
CHAIN   29   334  306     Peroxidase 65. PRO_0000023730
ACT_SITE   73    73        Proton acceptor (By similarity). 
METAL   74    74        Calcium 1 (By similarity). 
METAL   79    79        Calcium 1 (via carbonyl oxygen) (By similarity). 
METAL   81    81        Calcium 1 (By similarity). 
METAL   83    83        Calcium 1 (By similarity). 
METAL   201   201        Iron (heme axial ligand) (By similarity). 
METAL   202   202        Calcium 2 (By similarity). 
METAL   250   250        Calcium 2 (By similarity). 
METAL   253   253        Calcium 2 (By similarity). 
METAL   258   258        Calcium 2 (By similarity). 
BINDING   171   171        Substrate; via carbonyl oxygen (By similarity). 
SITE   69    69  1     Transition state stabilizer (By similarity). 
CARBOHYD   174   174        N-linked (GlcNAc...) (Potential). 
CARBOHYD   238   238        N-linked (GlcNAc...) (Potential). 
CARBOHYD   282   282        N-linked (GlcNAc...) (Potential). 
CARBOHYD   294   294        N-linked (GlcNAc...) (Potential). 
DISULFID   42   123        By similarity. 
DISULFID   75    80        By similarity. 
DISULFID   129   326        By similarity. 
DISULFID   208   236        By similarity. 
CONFLICT   16    16        L -> F (in Ref. 3; AAM65654). 
Sequence information
Length: 334 AA [This is the length of the unprocessed precursor] Molecular weight: 37014 Da [This is the MW of the unprocessed precursor] CRC64: DC07C78864450E44 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSNMQFSRGF NPFVILFCLA VVAPIISADV AILRTDYYQK TCPDFHKIVR EAVTTKQVQQ 

        70         80         90        100        110        120 
PTTAAGTLRL FFHDCFLEGC DASVLIATNS FNKAERDDDL NDSLPGDAFD IVTRIKTALE 

       130        140        150        160        170        180 
LSCPGVVSCA DILAQATRDL VTMVGGPYFD VKLGRKDGFE SKAHKVRGNV PMANQTVPDI 

       190        200        210        220        230        240 
HGIFKKNGFS LREMVALSGA HTIGFSHCKE FSDRLYGSRA DKEINPRFAA ALKDLCKNHT 

       250        260        270        280        290        300 
VDDTIAAFND VMTPGKFDNM YFKNLKRGLG LLASDHILIK DNSTKPFVDL YATNETAFFE 

       310        320        330 
DFARAMEKLG TVGVKGDKDG EVRRRCDHFN NLNV 

Q9FJR1 in FASTA format

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