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UniProtKB/Swiss-Prot entry Q9FL16


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PER63_ARATH
Primary accession number Q9FL16
Secondary accession number P93726
Integrated into Swiss-Prot on December 6, 2002
Sequence was last modified on March 1, 2001 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 58)
Name and origin of the protein
Protein name Peroxidase 63 [Precursor]
Synonyms Atperox P63
EC 1.11.1.7
ATP26a
Gene name
Name: PER63
Synonyms: P63
OrderedLocusNames: At5g40150
ORFNames: MSN9.5, MSN9.50
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.2.131; PubMed=9679202 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones.";
DNA Res. 5:131-145(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1071006; PubMed=11910074 [NCBI, ExPASy, EBI, Israel, Japan]
Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T., Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K., Shinagawa A., Shinozaki K.;
"Functional annotation of a full-length Arabidopsis cDNA collection.";
Science 296:141-145(2002).
[3]
NUCLEOTIDE SEQUENCE [MRNA] OF 53-328.
STRAIN=cv. Columbia;
Welinder K.G., Jespersen H.M., Kjaersgaard I.V.H., Justesen A.F., Oestergaard L., Abelskov A.K., Jensen R.B., Hansen L.N., Rasmussen S.K.;
"From expressed sequence tags to structure, function, evolution and expression of 28 ER-targeted Arabidopsis peroxidases.";
Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
[4]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1016/S0378-1119(02)00465-1; PubMed=12034502 [NCBI, ExPASy, EBI, Israel, Japan]
Tognolli M., Penel C., Greppin H., Simon P.;
"Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.";
Gene 288:129-138(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB010699; BAB10896.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK118632; BAC43229.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Y11791; CAA72487.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_198831.1; -.
UniGene At.88
3D structure databases
HSSP Q39034; 1QGJ. [HSSP ENTRY / PDB]
ModBase Q9FL16.
Protein family/group databases
PeroxiBase 229; AtPrx63.
Organism-specific databases
GeneFarm 1922; 61.
TAIR At5g40150; -.
Gene expression databases
ArrayExpress Q9FL16; -.
GermOnline AT5G40150; Arabidopsis thaliana.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9FL16.
Genome annotation databases
GeneID 834012; -.
GenomeReviews BA000015_GR; AT5G40150.
KEGG ath:AT5G40150; -.
NMPDR fig|3702.1.peg.25714; -.
Other
ProtoNet Q9FL16.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    27  27     Potential. 
CHAIN   28   328  301     Peroxidase 63. PRO_0000023728
ACT_SITE   72    72        Proton acceptor (By similarity). 
METAL   73    73        Calcium 1 (By similarity). 
METAL   78    78        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   80    80        Calcium 1 (By similarity). 
METAL   82    82        Calcium 1 (By similarity). 
METAL   200   200        Iron (heme axial ligand) (By similarity). 
METAL   201   201        Calcium 2 (By similarity). 
METAL   248   248        Calcium 2 (By similarity). 
METAL   251   251        Calcium 2 (By similarity). 
METAL   256   256        Calcium 2 (By similarity). 
BINDING   170   170        Substrate; via carbonyl oxygen (By similarity). 
SITE   68    68  1     Transition state stabilizer (By similarity). 
CARBOHYD   217   217        N-linked (GlcNAc...) (Potential). 
CARBOHYD   218   218        N-linked (GlcNAc...) (Potential). 
DISULFID   41   122        By similarity. 
DISULFID   74    79        By similarity. 
DISULFID   128   324        By similarity. 
DISULFID   207   234        By similarity. 
Sequence information
Length: 328 AA [This is the length of the unprocessed precursor] Molecular weight: 36120 Da [This is the MW of the unprocessed precursor] CRC64: 2171431964F09048 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAEQSQLKNL TIILLLLCLS FQSLSFAAES HLTVDFYSKS CPKFLDIIRE TITNKQISTP 

        70         80         90        100        110        120 
TTAAAALRLF FHDCFPNGCD ASVLVSSTAF NTAERDSSIN LSLPGDGFDV VIRAKTALEL 

       130        140        150        160        170        180 
ACPNTVSCSD IIAVAVRDLL VTVGGPYYEI SLGRRDSRTS KSSLVSDLLP LPSMQISKLI 

       190        200        210        220        230        240 
DQFSSRGFSV QEMVALSGAH TIGFSHCKEF TNRVNPNNST GYNPRFAVAL KKACSNSKND 

       250        260        270        280        290        300 
PTISVFNDVM TPNKFDNMYF QNIPKGLGLL ESDHGLFSDP RTRPFVELYA RDQSRFFNDF 

       310        320 
AGAMQKLSLH GVLTGRRGEI RRRCDAIN 

Q9FL16 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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