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UniProtKB/Swiss-Prot entry Q9FLC0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PER52_ARATH
Primary accession number Q9FLC0
Secondary accession numbers None
Integrated into Swiss-Prot on December 6, 2002
Sequence was last modified on March 1, 2001 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 58)
Name and origin of the protein
Protein name Peroxidase 52 [Precursor]
Synonyms Atperox P52
EC 1.11.1.7
ATP49
Gene name
Name: PER52
Synonyms: P52
OrderedLocusNames: At5g05340
ORFNames: K18I23.14
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.2.131; PubMed=9679202 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones.";
DNA Res. 5:131-145(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1016/S0378-1119(02)00465-1; PubMed=12034502 [NCBI, ExPASy, EBI, Israel, Japan]
Tognolli M., Penel C., Greppin H., Simon P.;
"Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.";
Gene 288:129-138(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB010692; BAB09977.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY065270; AAL38746.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_196153.1; -.
UniGene At.28537
3D structure databases
HSSP P22195; 1SCH. [HSSP ENTRY / PDB]
ModBase Q9FLC0.
Protein family/group databases
PeroxiBase 218; AtPrx52.
Organism-specific databases
GeneFarm 1905; 61.
TAIR At5g05340; -.
Gene expression databases
ArrayExpress Q9FLC0; -.
GermOnline AT5G05340; Arabidopsis thaliana.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9FLC0.
Genome annotation databases
GeneID 830416; -.
GenomeReviews BA000015_GR; AT5G05340.
KEGG ath:AT5G05340; -.
NMPDR fig|3702.1.peg.22639; -.
Other
ProtoNet Q9FLC0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    20  20     Potential. 
CHAIN   21   324  304     Peroxidase 52. PRO_0000023717
ACT_SITE   70    70        Proton acceptor (By similarity). 
METAL   71    71        Calcium 1 (By similarity). 
METAL   74    74        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   76    76        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   78    78        Calcium 1 (By similarity). 
METAL   80    80        Calcium 1 (By similarity). 
METAL   197   197        Iron (heme axial ligand) (By similarity). 
METAL   198   198        Calcium 2 (By similarity). 
METAL   244   244        Calcium 2 (By similarity). 
METAL   247   247        Calcium 2 (By similarity). 
METAL   252   252        Calcium 2 (By similarity). 
BINDING   167   167        Substrate; via carbonyl oxygen (By similarity). 
SITE   66    66  1     Transition state stabilizer (By similarity). 
CARBOHYD   213   213        N-linked (GlcNAc...) (Potential). 
DISULFID   39   119        By similarity. 
DISULFID   72    77        By similarity. 
DISULFID   125   320        By similarity. 
DISULFID   204   229        By similarity. 
Sequence information
Length: 324 AA [This is the length of the unprocessed precursor] Molecular weight: 34215 Da [This is the MW of the unprocessed precursor] CRC64: F891CD4EEEEC5AD4 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM 

        70         80         90        100        110        120 
GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN SARGFNVIDN IKSAVEKACP 

       130        140        150        160        170        180 
GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF 

       190        200        210        220        230        240 
SAVGLSTRDM VALSGAHTIG QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL 

       250        260        270        280        290        300 
APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM 

       310        320 
IKMGDISPLT GSSGEIRKVC GRTN 

Q9FLC0 in FASTA format

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