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UniProtKB/Swiss-Prot entry Q9SD46


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PER36_ARATH
Primary accession number Q9SD46
Secondary accession number Q0WLV3
Integrated into Swiss-Prot on November 25, 2002
Sequence was last modified on June 26, 2007 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 60)
Name and origin of the protein
Protein name Peroxidase 36 [Precursor]
Synonyms Atperox P36
EC 1.11.1.7
Gene name
Name: PER36
Synonyms: P36
OrderedLocusNames: At3g50990
ORFNames: F24M12.30
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048706; PubMed=11130713 [NCBI, ExPASy, EBI, Israel, Japan]
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
Nature 408:820-822(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-344.
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[4]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1016/S0378-1119(02)00465-1; PubMed=12034502 [NCBI, ExPASy, EBI, Israel, Japan]
Tognolli M., Penel C., Greppin H., Simon P.;
"Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.";
Gene 288:129-138(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL132980; CAB62621.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK229843; BAF01672.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK229896; BAF01724.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK229990; BAF01814.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK230084; BAF01904.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT010535; AAQ65158.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T45730; T45730.
RefSeq NP_190668.2; -.
UniGene At.35434
3D structure databases
HSSP Q39034; 1QGJ. [HSSP ENTRY / PDB]
ModBase Q9SD46.
Protein family/group databases
PeroxiBase 202; AtPrx36.
Organism-specific databases
GeneFarm 1863; 61.
TAIR At3g50990; -.
Gene expression databases
ArrayExpress Q9SD46; -.
GermOnline AT3G50990; Arabidopsis thaliana.
Family and domain databases
InterPro IPR002016; Haem_peroxidase_pln/fun/bac.
IPR000823; Peroxidase_pln.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00458; PEROXIDASE.
PR00461; PLPEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9SD46.
Genome annotation databases
GeneID 824263; -.
GenomeReviews BA000014_GR; AT3G50990.
KEGG ath:AT3G50990; -.
NMPDR fig|3702.1.peg.16350; -.
Other
ProtoNet Q9SD46.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Glycoprotein; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    28  28     Potential. 
CHAIN   29   344  316     Peroxidase 36. PRO_0000023702
ACT_SITE   81    81        Proton acceptor (By similarity). 
METAL   82    82        Calcium 1 (By similarity). 
METAL   85    85        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   87    87        Calcium 1; via carbonyl oxygen (By similarity). 
METAL   89    89        Calcium 1 (By similarity). 
METAL   91    91        Calcium 1 (By similarity). 
METAL   208   208        Iron (heme axial ligand) (By similarity). 
METAL   209   209        Calcium 2 (By similarity). 
METAL   260   260        Calcium 2 (By similarity). 
METAL   263   263        Calcium 2 (By similarity). 
METAL   268   268        Calcium 2 (By similarity). 
BINDING   178   178        Substrate; via carbonyl oxygen (By similarity). 
SITE   77    77  1     Transition state stabilizer (By similarity). 
CARBOHYD   224   224        N-linked (GlcNAc...) (Potential). 
DISULFID   50   130        By similarity. 
DISULFID   83    88        By similarity. 
DISULFID   136   337        By similarity. 
DISULFID   215   247        By similarity. 
Sequence information
Length: 344 AA [This is the length of the unprocessed precursor] Molecular weight: 38237 Da [This is the MW of the unprocessed precursor] CRC64: 0D86D9CE285EAB13 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNTKTVKSMA GIVLSQISLV ALFPLCICYQ THQSTSSVAS LSPQFYENSC PNAQAIVQSY 

        70         80         90        100        110        120 
VANAYFNDPR MAASILRLHF HDCFVNGCDA SVLLDSSGTM ESEKRSNANR DSARGFEVID 

       130        140        150        160        170        180 
EIKSALENEC PETVSCADLL ALVARDSIVI CGGPSWEVYL GRRDAREASL IGSMENIPSP 

       190        200        210        220        230        240 
ESTLQTILTM FNFQGLDLTD LVALLGSHTI GNSRCIGFRQ RLYNHTGNND PDQTLNQDYA 

       250        260        270        280        290        300 
SMLQQGCPIS GNDQNLFNLD YVTPTKFDNY YYKNLVNFRG LLSSDEILFT QSIETMEMVK 

       310        320        330        340 
YYAENEGAFF EQFAKSMVKM GNISPLTGTD GEIRRICRRV NHDV 

Q9SD46 in FASTA format

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