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UniProtKB/Swiss-Prot entry Q9X5C9


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name AROE_CORGL
Primary accession number Q9X5C9
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on July 26, 2002 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 60)
Name and origin of the protein
Protein name Shikimate dehydrogenase
Synonym EC 1.1.1.25
Gene name
Name: aroE
OrderedLocusNames: Cgl0424, cg0504
From
Corynebacterium glutamicum (Brevibacterium flavum) [TaxID: 1718] [HAMAP proteome]
Taxonomy Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 13059 / LMG 3658 / NCIB 10332 / AS019 / 613;
Joy J., O'Donohue M., Dunican L.K.;
"The cloning and phylogenetic analysis of the 3-dehydroquinase gene from Corynebacterium glutamicum.";
Submitted (JAN-1999) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025;
Nakagawa S.;
"Complete genomic sequence of Corynebacterium glutamicum ATCC 13032.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025;
DOI=10.1016/S0168-1656(03)00154-8; PubMed=12948626 [NCBI, ExPASy, EBI, Israel, Japan]
Kalinowski J., Bathe B., Bartels D., Bischoff N., Bott M., Burkovski A., Dusch N., Eggeling L., Eikmanns B.J., Gaigalat L., Goesmann A., Hartmann M., Huthmacher K., Kraemer R., Linke B., McHardy A.C., Meyer F., Moeckel B., Pfefferle W., Puehler A., Rey D.A., Rueckert C., Rupp O., Sahm H., Wendisch V.F., Wiegraebe I., Tauch A.;
"The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.";
J. Biotechnol. 104:5-25(2003).
[4]
X-RAY CRYSTALLOGRAPHY (1.64 ANGSTROMS), AND SUBUNIT.
Schoepe J., Niefind K., Schomburg D.;
"Crystal structure of the quinate dehydrogenase from Corynebacterium glutamicum.";
Submitted (NOV-2006) to the PDB data bank.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF124518; AAD30993.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BA000036; BAB97817.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX927149; CAF19140.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_599671.1; -.
YP_224726.1; -.
3D structure databases
PDB
2NLO; X-ray; 1.64 A; A=1-283.[ExPASy / RCSB / EBI]
PDBsum 2NLO; -.
ModBase Q9X5C9.
Enzyme and pathway databases
BioCyc CGLU196627-1:CG0504-MON; -.
Ontologies
GO
GO:0004764; Molecular function: shikimate 5-dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0009073; Biological process: aromatic amino acid family biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00222; -; 1.
PBIL [Tree]
InterPro IPR016040; NAD(P)-bd.
IPR013708; Shikimate_DHase-bd_N.
IPR000594; ThiF_NAD_FAD_bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF08501; Shikimate_dh_N; 1.
PF00899; ThiF; 1.
Pfam graphical view of domain structure.
BLOCKS Q9X5C9.
Genome annotation databases
GeneID 1021203; -.
3343183; -.
GenomeReviews BX927147_GR; cg0504.
BA000036_GR; Cgl0424.
KEGG cgb:cg0504; -.
cgl:NCgl0409; -.
Phylogenomic databases
HOGENOM Q9X5C9; -.
Genome annotation databases
CMR Q9X5C9; Cgl0424.
Other
ProtoNet Q9X5C9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Amino-acid biosynthesis; Aromatic amino acid biosynthesis; Complete proteome; NADP; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   283  283     Shikimate dehydrogenase. PRO_0000136001
NP_BIND   134   138  5     NADP (By similarity). 
NP_BIND   158   163  6     NADP (Potential). 
NP_BIND   251   255  5     NADP (By similarity). 
BINDING   110   110        Substrate (By similarity). 
CONFLICT   29    29        A -> P (in Ref. 1; AAD30993). 
CONFLICT   135   143        AGGVGNAVA -> RRRRKRSR (in Ref. 1; AAD30993). 
CONFLICT   211   211        Missing (in Ref. 1; AAD30993). 
CONFLICT   272   273        DV -> T (in Ref. 1; AAD30993). 
STRAND   5    13  9      
HELIX   19    29  11      
STRAND   34    40  7      
TURN   44    48  5      
HELIX   51    60  10      
STRAND   65    68  4      
TURN   73    76  4      
HELIX   77    79  3      
STRAND   80    83  4      
HELIX   85    90  6      
STRAND   95    98  4      
STRAND   104   107  4      
HELIX   109   121  13      
STRAND   128   133  6      
HELIX   139   148  10      
STRAND   152   160  9      
HELIX   161   175  15      
STRAND   180   185  6      
HELIX   188   194  7      
STRAND   195   200  6      
HELIX   216   218  3      
STRAND   224   228  5      
STRAND   231   234  4      
HELIX   236   244  9      
STRAND   247   249  3      
HELIX   252   267  16      
HELIX   273   281  9      
Sequence information
Length: 283 AA [This is the length of the unprocessed precursor] Molecular weight: 29697 Da [This is the MW of the unprocessed precursor] CRC64: 2DBCE25D186DAF74 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNDSILLGLI GQGLDLSRTP AMHEAEGLAQ GRATVYRRID TLGSRASGQD LKTLLDAALY 

        70         80         90        100        110        120 
LGFNGLNITH PYKQAVLPLL DEVSEQATQL GAVNTVVIDA TGHTTGHNTD VSGFGRGMEE 

       130        140        150        160        170        180 
GLPNAKLDSV VQVGAGGVGN AVAYALVTHG VQKLQVADLD TSRAQALADV INNAVGREAV 

       190        200        210        220        230        240 
VGVDARGIED VIAAADGVVN ATPMGMPAHP GTAFDVSCLT KDHWVGDVVY MPIETELLKA 

       250        260        270        280 
ARALGCETLD GTRMAIHQAV DAFRLFTGLE PDVSRMRETF LSL 

Q9X5C9 in FASTA format

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